Hb_000170_090

Information

Type -
Description -
Location Contig170: 97809-109835
Sequence    

Annotation

kegg
ID rcu:RCOM_0561530
description UDP-n-acteylglucosamine pyrophosphorylase, putative
nr
ID XP_012078333.1
description PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
swissprot
ID Q0GZS3
description UDP-sugar pyrophosphorylase OS=Cucumis melo GN=USP PE=1 SV=1
trembl
ID A0A067KKS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12162 PE=4 SV=1
Gene Ontology
ID GO:0005829
description udp-sugar pyrophosphorylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15863: 97763-109669
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000170_090 0.0 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
2 Hb_105328_020 0.0455687091 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
3 Hb_001377_310 0.0486646692 transcription factor TF Family: Coactivator p15 PREDICTED: uncharacterized protein LOC105642839 [Jatropha curcas]
4 Hb_004586_220 0.0511451225 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
5 Hb_013399_020 0.0517877239 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
6 Hb_000976_140 0.0520727929 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
7 Hb_000345_160 0.054720482 - - PREDICTED: acyl-CoA-binding domain-containing protein 4-like [Jatropha curcas]
8 Hb_005730_040 0.0565072701 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
9 Hb_015807_050 0.0586422712 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
10 Hb_020378_030 0.0615994248 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
11 Hb_004452_110 0.0650779736 - - PREDICTED: uncharacterized protein LOC105639575 isoform X1 [Jatropha curcas]
12 Hb_002681_090 0.065494593 - - PREDICTED: golgin candidate 6 isoform X1 [Jatropha curcas]
13 Hb_021374_010 0.0655086726 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-A1 [Populus euphratica]
14 Hb_003861_050 0.0657099484 - - PREDICTED: uncharacterized protein LOC105650779 [Jatropha curcas]
15 Hb_000313_220 0.0661338821 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
16 Hb_002989_020 0.067066446 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
17 Hb_000035_470 0.0673598672 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
18 Hb_003363_080 0.067493103 - - eukaryotic translation elongation factor 1B gamma-subunit [Hevea brasiliensis]
19 Hb_003517_040 0.068083463 - - PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Jatropha curcas]
20 Hb_001481_060 0.0686444813 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000170_090 Hb_000170_090 Hb_105328_020 Hb_105328_020 Hb_000170_090--Hb_105328_020 Hb_001377_310 Hb_001377_310 Hb_000170_090--Hb_001377_310 Hb_004586_220 Hb_004586_220 Hb_000170_090--Hb_004586_220 Hb_013399_020 Hb_013399_020 Hb_000170_090--Hb_013399_020 Hb_000976_140 Hb_000976_140 Hb_000170_090--Hb_000976_140 Hb_000345_160 Hb_000345_160 Hb_000170_090--Hb_000345_160 Hb_000345_380 Hb_000345_380 Hb_105328_020--Hb_000345_380 Hb_011037_030 Hb_011037_030 Hb_105328_020--Hb_011037_030 Hb_006588_170 Hb_006588_170 Hb_105328_020--Hb_006588_170 Hb_105328_020--Hb_013399_020 Hb_000156_010 Hb_000156_010 Hb_105328_020--Hb_000156_010 Hb_000035_110 Hb_000035_110 Hb_001377_310--Hb_000035_110 Hb_005460_050 Hb_005460_050 Hb_001377_310--Hb_005460_050 Hb_000373_080 Hb_000373_080 Hb_001377_310--Hb_000373_080 Hb_003861_050 Hb_003861_050 Hb_001377_310--Hb_003861_050 Hb_004586_060 Hb_004586_060 Hb_001377_310--Hb_004586_060 Hb_020378_030 Hb_020378_030 Hb_004586_220--Hb_020378_030 Hb_001814_030 Hb_001814_030 Hb_004586_220--Hb_001814_030 Hb_000537_050 Hb_000537_050 Hb_004586_220--Hb_000537_050 Hb_000138_100 Hb_000138_100 Hb_004586_220--Hb_000138_100 Hb_000441_220 Hb_000441_220 Hb_004586_220--Hb_000441_220 Hb_000923_010 Hb_000923_010 Hb_013399_020--Hb_000923_010 Hb_013399_020--Hb_000441_220 Hb_003683_020 Hb_003683_020 Hb_013399_020--Hb_003683_020 Hb_093458_040 Hb_093458_040 Hb_013399_020--Hb_093458_040 Hb_005730_040 Hb_005730_040 Hb_000976_140--Hb_005730_040 Hb_000313_220 Hb_000313_220 Hb_000976_140--Hb_000313_220 Hb_002849_130 Hb_002849_130 Hb_000976_140--Hb_002849_130 Hb_015807_050 Hb_015807_050 Hb_000976_140--Hb_015807_050 Hb_001922_150 Hb_001922_150 Hb_000976_140--Hb_001922_150 Hb_004037_020 Hb_004037_020 Hb_000345_160--Hb_004037_020 Hb_004705_170 Hb_004705_170 Hb_000345_160--Hb_004705_170 Hb_001481_060 Hb_001481_060 Hb_000345_160--Hb_001481_060 Hb_000049_020 Hb_000049_020 Hb_000345_160--Hb_000049_020 Hb_004452_110 Hb_004452_110 Hb_000345_160--Hb_004452_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.45216 7.80632 8.26736 9.86209 6.98805 9.62122
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.17022 5.43992 5.49879 8.96272 7.90954

CAGE analysis