Hb_000976_140

Information

Type -
Description -
Location Contig976: 143556-147740
Sequence    

Annotation

kegg
ID tcc:TCM_032425
description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein isoform 1
nr
ID XP_012087409.1
description PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMA5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22651 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64062: 143665-147777 , PASA_asmbl_64063: 143665-147777 , PASA_asmbl_64065: 144675-144797
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000976_140 0.0 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
2 Hb_005730_040 0.0347572996 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
3 Hb_000313_220 0.0355641232 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
4 Hb_002849_130 0.038434814 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
5 Hb_015807_050 0.0480121243 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
6 Hb_001922_150 0.0516158047 - - PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
7 Hb_000170_090 0.0520727929 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
8 Hb_093458_040 0.0542481967 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
9 Hb_005867_070 0.0559792498 - - DNA binding protein, putative [Ricinus communis]
10 Hb_000035_470 0.0561936169 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
11 Hb_003517_040 0.0562951479 - - PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Jatropha curcas]
12 Hb_002986_100 0.0563673358 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
13 Hb_004452_110 0.0568235849 - - PREDICTED: uncharacterized protein LOC105639575 isoform X1 [Jatropha curcas]
14 Hb_183433_010 0.05717173 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
15 Hb_014834_150 0.0597655283 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 1, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_002989_020 0.0617572135 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
17 Hb_001959_110 0.0622201152 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
18 Hb_003861_050 0.0622432648 - - PREDICTED: uncharacterized protein LOC105650779 [Jatropha curcas]
19 Hb_000345_160 0.0625944686 - - PREDICTED: acyl-CoA-binding domain-containing protein 4-like [Jatropha curcas]
20 Hb_006831_140 0.0629979117 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000976_140 Hb_000976_140 Hb_005730_040 Hb_005730_040 Hb_000976_140--Hb_005730_040 Hb_000313_220 Hb_000313_220 Hb_000976_140--Hb_000313_220 Hb_002849_130 Hb_002849_130 Hb_000976_140--Hb_002849_130 Hb_015807_050 Hb_015807_050 Hb_000976_140--Hb_015807_050 Hb_001922_150 Hb_001922_150 Hb_000976_140--Hb_001922_150 Hb_000170_090 Hb_000170_090 Hb_000976_140--Hb_000170_090 Hb_005730_040--Hb_002849_130 Hb_005867_070 Hb_005867_070 Hb_005730_040--Hb_005867_070 Hb_000708_030 Hb_000708_030 Hb_005730_040--Hb_000708_030 Hb_005730_040--Hb_000170_090 Hb_001225_040 Hb_001225_040 Hb_005730_040--Hb_001225_040 Hb_000313_220--Hb_002849_130 Hb_000313_220--Hb_015807_050 Hb_001959_110 Hb_001959_110 Hb_000313_220--Hb_001959_110 Hb_004452_110 Hb_004452_110 Hb_000313_220--Hb_004452_110 Hb_000313_220--Hb_005730_040 Hb_093458_040 Hb_093458_040 Hb_002849_130--Hb_093458_040 Hb_003428_010 Hb_003428_010 Hb_002849_130--Hb_003428_010 Hb_002849_130--Hb_015807_050 Hb_109980_010 Hb_109980_010 Hb_015807_050--Hb_109980_010 Hb_000035_470 Hb_000035_470 Hb_015807_050--Hb_000035_470 Hb_000258_070 Hb_000258_070 Hb_015807_050--Hb_000258_070 Hb_019280_030 Hb_019280_030 Hb_001922_150--Hb_019280_030 Hb_001922_150--Hb_000313_220 Hb_001922_150--Hb_005730_040 Hb_004020_040 Hb_004020_040 Hb_001922_150--Hb_004020_040 Hb_007416_340 Hb_007416_340 Hb_001922_150--Hb_007416_340 Hb_105328_020 Hb_105328_020 Hb_000170_090--Hb_105328_020 Hb_001377_310 Hb_001377_310 Hb_000170_090--Hb_001377_310 Hb_004586_220 Hb_004586_220 Hb_000170_090--Hb_004586_220 Hb_013399_020 Hb_013399_020 Hb_000170_090--Hb_013399_020 Hb_000345_160 Hb_000345_160 Hb_000170_090--Hb_000345_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.75725 11.0638 12.4028 13.7099 9.75239 11.4946
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.12 10.9587 7.39212 11.4117 12.0421

CAGE analysis