Hb_000035_470

Information

Type -
Description -
Location Contig35: 436687-445188
Sequence    

Annotation

kegg
ID rcu:RCOM_0920180
description Protein ABC1, mitochondrial precursor, putative
nr
ID XP_012076378.1
description PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
swissprot
ID Q55680
description Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1
trembl
ID A0A067KNU0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07050 PE=4 SV=1
Gene Ontology
ID GO:0004672
description uncharacterized aarf domain-containing protein kinase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36455: 436718-436846 , PASA_asmbl_36456: 436939-439772 , PASA_asmbl_36457: 440041-442453 , PASA_asmbl_36458: 442534-443524 , PASA_asmbl_36459: 444508-445061
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_470 0.0 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
2 Hb_004319_080 0.0525833311 - - PREDICTED: GPI ethanolamine phosphate transferase 1 [Jatropha curcas]
3 Hb_015807_050 0.0533261001 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
4 Hb_001021_150 0.0549927973 - - PREDICTED: metal tolerance protein C1 [Jatropha curcas]
5 Hb_168978_030 0.0558155569 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
6 Hb_002073_190 0.055927007 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
7 Hb_000976_140 0.0561936169 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
8 Hb_000640_170 0.0562853145 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
9 Hb_001040_100 0.0563886434 - - PREDICTED: general transcription factor IIH subunit 4 [Jatropha curcas]
10 Hb_000329_800 0.0595542794 - - conserved hypothetical protein [Ricinus communis]
11 Hb_123915_040 0.0626955001 - - PREDICTED: uncharacterized protein LOC105633952 [Jatropha curcas]
12 Hb_000138_100 0.0627285864 - - bifunctional purine biosynthesis protein, putative [Ricinus communis]
13 Hb_006831_140 0.063239652 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
14 Hb_000417_130 0.0632535257 - - PREDICTED: SAP30-binding protein isoform X2 [Jatropha curcas]
15 Hb_003861_050 0.065167948 - - PREDICTED: uncharacterized protein LOC105650779 [Jatropha curcas]
16 Hb_013399_020 0.0657048081 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
17 Hb_002986_100 0.0660234191 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
18 Hb_000313_220 0.0660708986 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
19 Hb_009898_050 0.0661621003 - - PREDICTED: beta-taxilin [Jatropha curcas]
20 Hb_001959_110 0.0671842746 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000035_470 Hb_000035_470 Hb_004319_080 Hb_004319_080 Hb_000035_470--Hb_004319_080 Hb_015807_050 Hb_015807_050 Hb_000035_470--Hb_015807_050 Hb_001021_150 Hb_001021_150 Hb_000035_470--Hb_001021_150 Hb_168978_030 Hb_168978_030 Hb_000035_470--Hb_168978_030 Hb_002073_190 Hb_002073_190 Hb_000035_470--Hb_002073_190 Hb_000976_140 Hb_000976_140 Hb_000035_470--Hb_000976_140 Hb_000329_800 Hb_000329_800 Hb_004319_080--Hb_000329_800 Hb_001301_150 Hb_001301_150 Hb_004319_080--Hb_001301_150 Hb_001040_100 Hb_001040_100 Hb_004319_080--Hb_001040_100 Hb_003883_060 Hb_003883_060 Hb_004319_080--Hb_003883_060 Hb_000640_170 Hb_000640_170 Hb_004319_080--Hb_000640_170 Hb_000313_220 Hb_000313_220 Hb_015807_050--Hb_000313_220 Hb_015807_050--Hb_000976_140 Hb_109980_010 Hb_109980_010 Hb_015807_050--Hb_109980_010 Hb_002849_130 Hb_002849_130 Hb_015807_050--Hb_002849_130 Hb_000258_070 Hb_000258_070 Hb_015807_050--Hb_000258_070 Hb_002592_060 Hb_002592_060 Hb_001021_150--Hb_002592_060 Hb_008847_030 Hb_008847_030 Hb_001021_150--Hb_008847_030 Hb_001946_400 Hb_001946_400 Hb_001021_150--Hb_001946_400 Hb_006831_140 Hb_006831_140 Hb_001021_150--Hb_006831_140 Hb_000905_110 Hb_000905_110 Hb_001021_150--Hb_000905_110 Hb_168978_030--Hb_000640_170 Hb_000617_180 Hb_000617_180 Hb_168978_030--Hb_000617_180 Hb_105328_020 Hb_105328_020 Hb_168978_030--Hb_105328_020 Hb_002044_150 Hb_002044_150 Hb_168978_030--Hb_002044_150 Hb_000156_010 Hb_000156_010 Hb_168978_030--Hb_000156_010 Hb_002073_190--Hb_015807_050 Hb_000035_110 Hb_000035_110 Hb_002073_190--Hb_000035_110 Hb_000000_150 Hb_000000_150 Hb_002073_190--Hb_000000_150 Hb_001377_310 Hb_001377_310 Hb_002073_190--Hb_001377_310 Hb_002272_130 Hb_002272_130 Hb_002073_190--Hb_002272_130 Hb_005730_040 Hb_005730_040 Hb_000976_140--Hb_005730_040 Hb_000976_140--Hb_000313_220 Hb_000976_140--Hb_002849_130 Hb_001922_150 Hb_001922_150 Hb_000976_140--Hb_001922_150 Hb_000170_090 Hb_000170_090 Hb_000976_140--Hb_000170_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.40547 3.45826 5.27185 5.37198 5.08887 5.72948
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.41055 4.9156 3.2971 5.76373 4.88281

CAGE analysis