Hb_001922_150

Information

Type -
Description -
Location Contig1922: 128247-133804
Sequence    

Annotation

kegg
ID rcu:RCOM_1581460
description hypothetical protein
nr
ID XP_012090146.1
description PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
swissprot
ID Q55FJ2
description WD repeat-containing protein 91 homolog OS=Dictyostelium discoideum GN=wdr91 PE=3 SV=1
trembl
ID B9RIP8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1581460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19166: 128248-133816 , PASA_asmbl_19167: 128287-131166
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001922_150 0.0 - - PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
2 Hb_000976_140 0.0516158047 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
3 Hb_019280_030 0.0585679995 - - -
4 Hb_000313_220 0.0616840116 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
5 Hb_005730_040 0.0618519851 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
6 Hb_004020_040 0.0631735412 - - PREDICTED: GTP-binding protein At3g49725, chloroplastic [Jatropha curcas]
7 Hb_007416_340 0.0632696621 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic isoform X1 [Jatropha curcas]
8 Hb_002849_130 0.0677440159 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
9 Hb_001959_110 0.0681900878 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
10 Hb_001635_160 0.0693121813 - - hypothetical protein JCGZ_24810 [Jatropha curcas]
11 Hb_011609_140 0.0697475322 - - hypothetical protein JCGZ_12974 [Jatropha curcas]
12 Hb_001089_030 0.0705276339 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
13 Hb_015807_050 0.0712498898 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
14 Hb_001225_040 0.0714680401 - - PREDICTED: meiosis-specific nuclear structural protein 1 isoform X5 [Jatropha curcas]
15 Hb_000116_450 0.0717875662 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 1 [Jatropha curcas]
16 Hb_002986_100 0.0722398184 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
17 Hb_002028_210 0.0724066161 - - PREDICTED: uncharacterized protein LOC105638038 [Jatropha curcas]
18 Hb_000258_070 0.0738116907 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
19 Hb_000484_030 0.0738388994 - - PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Jatropha curcas]
20 Hb_004452_110 0.074118931 - - PREDICTED: uncharacterized protein LOC105639575 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001922_150 Hb_001922_150 Hb_000976_140 Hb_000976_140 Hb_001922_150--Hb_000976_140 Hb_019280_030 Hb_019280_030 Hb_001922_150--Hb_019280_030 Hb_000313_220 Hb_000313_220 Hb_001922_150--Hb_000313_220 Hb_005730_040 Hb_005730_040 Hb_001922_150--Hb_005730_040 Hb_004020_040 Hb_004020_040 Hb_001922_150--Hb_004020_040 Hb_007416_340 Hb_007416_340 Hb_001922_150--Hb_007416_340 Hb_000976_140--Hb_005730_040 Hb_000976_140--Hb_000313_220 Hb_002849_130 Hb_002849_130 Hb_000976_140--Hb_002849_130 Hb_015807_050 Hb_015807_050 Hb_000976_140--Hb_015807_050 Hb_000170_090 Hb_000170_090 Hb_000976_140--Hb_000170_090 Hb_019280_030--Hb_007416_340 Hb_004097_070 Hb_004097_070 Hb_019280_030--Hb_004097_070 Hb_000200_380 Hb_000200_380 Hb_019280_030--Hb_000200_380 Hb_000484_030 Hb_000484_030 Hb_019280_030--Hb_000484_030 Hb_033642_030 Hb_033642_030 Hb_019280_030--Hb_033642_030 Hb_000313_220--Hb_002849_130 Hb_000313_220--Hb_015807_050 Hb_001959_110 Hb_001959_110 Hb_000313_220--Hb_001959_110 Hb_004452_110 Hb_004452_110 Hb_000313_220--Hb_004452_110 Hb_000313_220--Hb_005730_040 Hb_005730_040--Hb_002849_130 Hb_005867_070 Hb_005867_070 Hb_005730_040--Hb_005867_070 Hb_000708_030 Hb_000708_030 Hb_005730_040--Hb_000708_030 Hb_005730_040--Hb_000170_090 Hb_001225_040 Hb_001225_040 Hb_005730_040--Hb_001225_040 Hb_021374_010 Hb_021374_010 Hb_004020_040--Hb_021374_010 Hb_000035_110 Hb_000035_110 Hb_004020_040--Hb_000035_110 Hb_001040_100 Hb_001040_100 Hb_004020_040--Hb_001040_100 Hb_000227_220 Hb_000227_220 Hb_004020_040--Hb_000227_220 Hb_001377_310 Hb_001377_310 Hb_004020_040--Hb_001377_310 Hb_003125_120 Hb_003125_120 Hb_007416_340--Hb_003125_120 Hb_003938_090 Hb_003938_090 Hb_007416_340--Hb_003938_090 Hb_007416_340--Hb_000484_030 Hb_008453_140 Hb_008453_140 Hb_007416_340--Hb_008453_140 Hb_001946_400 Hb_001946_400 Hb_007416_340--Hb_001946_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.64322 8.26194 7.69847 9.23776 6.55343 9.27965
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.16523 8.39807 4.59624 6.05668 7.75269

CAGE analysis