Hb_000000_150

Information

Type -
Description -
Location Contig0: 254974-264197
Sequence    

Annotation

kegg
ID rcu:RCOM_1593870
description hypothetical protein
nr
ID XP_012071759.1
description PREDICTED: uncharacterized protein LOC105633730 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9R7R5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1593870 PE=4 SV=1
Gene Ontology
ID GO:0005634
description at5g42660 mjb21_3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00032: 260704-260816 , PASA_asmbl_00033: 262434-262839 , PASA_asmbl_00034: 262917-263160 , PASA_asmbl_00035: 263195-263935
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_150 0.0 - - PREDICTED: uncharacterized protein LOC105633730 [Jatropha curcas]
2 Hb_002073_190 0.0709390505 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
3 Hb_001232_190 0.0769373659 - - PREDICTED: uncharacterized protein LOC105639761 isoform X2 [Jatropha curcas]
4 Hb_002374_370 0.0815946608 - - protein with unknown function [Ricinus communis]
5 Hb_023313_030 0.0844437917 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000035_470 0.0856644807 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
7 Hb_008616_050 0.0859865054 - - PREDICTED: putative deoxyribonuclease TATDN1 [Jatropha curcas]
8 Hb_000336_210 0.0871983347 - - PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
9 Hb_002553_060 0.0885554972 - - PREDICTED: electron transfer flavoprotein subunit beta, mitochondrial [Jatropha curcas]
10 Hb_004319_080 0.0896767127 - - PREDICTED: GPI ethanolamine phosphate transferase 1 [Jatropha curcas]
11 Hb_000579_120 0.0909907298 - - PREDICTED: uncharacterized protein LOC105633845 [Jatropha curcas]
12 Hb_001318_280 0.0932047192 - - Protein FAM18B, putative [Ricinus communis]
13 Hb_000207_150 0.0946212752 - - PREDICTED: uncharacterized membrane protein At4g09580 [Jatropha curcas]
14 Hb_005618_050 0.0949795368 - - PREDICTED: charged multivesicular body protein 7 isoform X1 [Jatropha curcas]
15 Hb_000302_310 0.0954938962 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
16 Hb_002986_100 0.0956321735 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
17 Hb_000006_010 0.096899711 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000976_140 0.0986500964 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
19 Hb_001123_030 0.0997425394 - - ABC transporter family protein [Hevea brasiliensis]
20 Hb_001214_060 0.0998297607 - - PREDICTED: phosphoinositide phosphatase SAC8 [Jatropha curcas]

Gene co-expression network

sample Hb_000000_150 Hb_000000_150 Hb_002073_190 Hb_002073_190 Hb_000000_150--Hb_002073_190 Hb_001232_190 Hb_001232_190 Hb_000000_150--Hb_001232_190 Hb_002374_370 Hb_002374_370 Hb_000000_150--Hb_002374_370 Hb_023313_030 Hb_023313_030 Hb_000000_150--Hb_023313_030 Hb_000035_470 Hb_000035_470 Hb_000000_150--Hb_000035_470 Hb_008616_050 Hb_008616_050 Hb_000000_150--Hb_008616_050 Hb_002073_190--Hb_000035_470 Hb_015807_050 Hb_015807_050 Hb_002073_190--Hb_015807_050 Hb_000035_110 Hb_000035_110 Hb_002073_190--Hb_000035_110 Hb_001377_310 Hb_001377_310 Hb_002073_190--Hb_001377_310 Hb_002272_130 Hb_002272_130 Hb_002073_190--Hb_002272_130 Hb_001232_190--Hb_008616_050 Hb_000579_120 Hb_000579_120 Hb_001232_190--Hb_000579_120 Hb_109000_020 Hb_109000_020 Hb_001232_190--Hb_109000_020 Hb_002641_060 Hb_002641_060 Hb_001232_190--Hb_002641_060 Hb_000058_130 Hb_000058_130 Hb_001232_190--Hb_000058_130 Hb_000207_150 Hb_000207_150 Hb_001232_190--Hb_000207_150 Hb_000116_450 Hb_000116_450 Hb_002374_370--Hb_000116_450 Hb_000258_070 Hb_000258_070 Hb_002374_370--Hb_000258_070 Hb_000347_430 Hb_000347_430 Hb_002374_370--Hb_000347_430 Hb_028512_020 Hb_028512_020 Hb_002374_370--Hb_028512_020 Hb_000340_530 Hb_000340_530 Hb_002374_370--Hb_000340_530 Hb_002217_250 Hb_002217_250 Hb_002374_370--Hb_002217_250 Hb_002728_080 Hb_002728_080 Hb_023313_030--Hb_002728_080 Hb_005797_010 Hb_005797_010 Hb_023313_030--Hb_005797_010 Hb_000215_300 Hb_000215_300 Hb_023313_030--Hb_000215_300 Hb_000313_220 Hb_000313_220 Hb_023313_030--Hb_000313_220 Hb_000976_140 Hb_000976_140 Hb_023313_030--Hb_000976_140 Hb_002849_130 Hb_002849_130 Hb_023313_030--Hb_002849_130 Hb_004319_080 Hb_004319_080 Hb_000035_470--Hb_004319_080 Hb_000035_470--Hb_015807_050 Hb_001021_150 Hb_001021_150 Hb_000035_470--Hb_001021_150 Hb_168978_030 Hb_168978_030 Hb_000035_470--Hb_168978_030 Hb_000035_470--Hb_000976_140 Hb_008616_050--Hb_002641_060 Hb_004545_110 Hb_004545_110 Hb_008616_050--Hb_004545_110 Hb_009898_050 Hb_009898_050 Hb_008616_050--Hb_009898_050 Hb_001318_280 Hb_001318_280 Hb_008616_050--Hb_001318_280 Hb_008847_030 Hb_008847_030 Hb_008616_050--Hb_008847_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.91801 2.61372 4.74622 6.02328 5.26406 4.4102
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.10647 4.84602 1.65561 4.00526 3.89194

CAGE analysis