Hb_012423_010

Information

Type -
Description -
Location Contig12423: 9812-10290
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012423_010 0.0 - - -
2 Hb_009848_040 0.1409133812 - - hypothetical protein B456_009G349600 [Gossypium raimondii]
3 Hb_000152_670 0.1853823063 - - hypothetical protein VITISV_037603 [Vitis vinifera]
4 Hb_003025_050 0.1886517115 - - PREDICTED: citrate synthase, glyoxysomal [Jatropha curcas]
5 Hb_167234_010 0.193292822 - - PREDICTED: AT-hook motif nuclear-localized protein 13-like [Jatropha curcas]
6 Hb_002027_380 0.1975293783 - - PREDICTED: secoisolariciresinol dehydrogenase isoform X2 [Jatropha curcas]
7 Hb_000449_050 0.2009297217 - - Protein bem46, putative [Ricinus communis]
8 Hb_012180_050 0.2021658039 - - PREDICTED: uncharacterized protein LOC105632355 isoform X3 [Jatropha curcas]
9 Hb_002316_050 0.2053731277 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004017_040 0.2080626408 - - kinetochore protein nuf2, putative [Ricinus communis]
11 Hb_003640_020 0.2084290208 - - pelota, putative [Ricinus communis]
12 Hb_004096_080 0.2090099348 - - PREDICTED: IST1 homolog [Jatropha curcas]
13 Hb_001218_050 0.2115230286 - - Ribosome-binding protein, putative [Ricinus communis]
14 Hb_000703_210 0.2122491181 - - Inactive protein kinase [Gossypium arboreum]
15 Hb_084429_010 0.2135871687 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Populus euphratica]
16 Hb_031527_090 0.2146417486 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 1 isoform X2 [Jatropha curcas]
17 Hb_036790_130 0.2158471744 - - -
18 Hb_128376_010 0.2160158164 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_004586_280 0.216535711 - - PREDICTED: GEM-like protein 1 [Jatropha curcas]
20 Hb_000123_330 0.2165875881 - - hypothetical protein M569_14136, partial [Genlisea aurea]

Gene co-expression network

sample Hb_012423_010 Hb_012423_010 Hb_009848_040 Hb_009848_040 Hb_012423_010--Hb_009848_040 Hb_000152_670 Hb_000152_670 Hb_012423_010--Hb_000152_670 Hb_003025_050 Hb_003025_050 Hb_012423_010--Hb_003025_050 Hb_167234_010 Hb_167234_010 Hb_012423_010--Hb_167234_010 Hb_002027_380 Hb_002027_380 Hb_012423_010--Hb_002027_380 Hb_000449_050 Hb_000449_050 Hb_012423_010--Hb_000449_050 Hb_084429_010 Hb_084429_010 Hb_009848_040--Hb_084429_010 Hb_009848_030 Hb_009848_030 Hb_009848_040--Hb_009848_030 Hb_004096_080 Hb_004096_080 Hb_009848_040--Hb_004096_080 Hb_002235_140 Hb_002235_140 Hb_009848_040--Hb_002235_140 Hb_006588_150 Hb_006588_150 Hb_009848_040--Hb_006588_150 Hb_001052_040 Hb_001052_040 Hb_000152_670--Hb_001052_040 Hb_128376_010 Hb_128376_010 Hb_000152_670--Hb_128376_010 Hb_000996_180 Hb_000996_180 Hb_000152_670--Hb_000996_180 Hb_004017_040 Hb_004017_040 Hb_000152_670--Hb_004017_040 Hb_015354_010 Hb_015354_010 Hb_000152_670--Hb_015354_010 Hb_009646_050 Hb_009646_050 Hb_000152_670--Hb_009646_050 Hb_002666_080 Hb_002666_080 Hb_003025_050--Hb_002666_080 Hb_002890_100 Hb_002890_100 Hb_003025_050--Hb_002890_100 Hb_003780_090 Hb_003780_090 Hb_003025_050--Hb_003780_090 Hb_118840_050 Hb_118840_050 Hb_003025_050--Hb_118840_050 Hb_005333_030 Hb_005333_030 Hb_003025_050--Hb_005333_030 Hb_000215_190 Hb_000215_190 Hb_003025_050--Hb_000215_190 Hb_003211_010 Hb_003211_010 Hb_167234_010--Hb_003211_010 Hb_118026_010 Hb_118026_010 Hb_167234_010--Hb_118026_010 Hb_030736_070 Hb_030736_070 Hb_167234_010--Hb_030736_070 Hb_056987_010 Hb_056987_010 Hb_167234_010--Hb_056987_010 Hb_004586_280 Hb_004586_280 Hb_167234_010--Hb_004586_280 Hb_001055_030 Hb_001055_030 Hb_167234_010--Hb_001055_030 Hb_003640_020 Hb_003640_020 Hb_002027_380--Hb_003640_020 Hb_130389_010 Hb_130389_010 Hb_002027_380--Hb_130389_010 Hb_000120_420 Hb_000120_420 Hb_002027_380--Hb_000120_420 Hb_000836_370 Hb_000836_370 Hb_002027_380--Hb_000836_370 Hb_005203_020 Hb_005203_020 Hb_002027_380--Hb_005203_020 Hb_001369_770 Hb_001369_770 Hb_002027_380--Hb_001369_770 Hb_001189_130 Hb_001189_130 Hb_000449_050--Hb_001189_130 Hb_000340_110 Hb_000340_110 Hb_000449_050--Hb_000340_110 Hb_001638_040 Hb_001638_040 Hb_000449_050--Hb_001638_040 Hb_002477_150 Hb_002477_150 Hb_000449_050--Hb_002477_150 Hb_124677_060 Hb_124677_060 Hb_000449_050--Hb_124677_060 Hb_004032_180 Hb_004032_180 Hb_000449_050--Hb_004032_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.05278 2.14932 0.707537 0.735878 1.24264 1.87005
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.629753 0.61833 0 1.24644 0

CAGE analysis