Hb_010810_110

Information

Type -
Description -
Location Contig10810: 65846-69026
Sequence    

Annotation

kegg
ID rcu:RCOM_1729460
description wall-associated kinase, putative (EC:2.7.10.2)
nr
ID XP_012078062.1
description PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q5BQ05
description Uncharacterized protein At1g18380 OS=Arabidopsis thaliana GN=At1g18380 PE=2 SV=1
trembl
ID B9RSP6
description Wall-associated kinase, putative OS=Ricinus communis GN=RCOM_1729460 PE=3 SV=1
Gene Ontology
ID GO:0030247
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010810_110 0.0 - - PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_001652_040 0.280554215 - - PREDICTED: uncharacterized protein LOC103341683 [Prunus mume]
3 Hb_004143_120 0.3011116276 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
4 Hb_002780_060 0.3035468103 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002849_160 0.3052224644 - - PREDICTED: uncharacterized protein LOC105642953 isoform X2 [Jatropha curcas]
6 Hb_016834_010 0.315462467 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
7 Hb_002477_220 0.3180071189 - - hypothetical protein POPTR_0017s06650g [Populus trichocarpa]
8 Hb_182680_010 0.3190798526 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
9 Hb_060411_010 0.3208363311 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
10 Hb_070758_010 0.3227978471 - - -
11 Hb_000041_010 0.3300565479 - - pfkB-type carbohydrate kinase family protein [Populus trichocarpa]
12 Hb_000041_060 0.3304318226 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
13 Hb_001098_050 0.3310858191 - - PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera]
14 Hb_062671_010 0.3318178093 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
15 Hb_004228_040 0.3381341667 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
16 Hb_027760_090 0.3383285875 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
17 Hb_004920_010 0.3387876011 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
18 Hb_108557_010 0.3389342793 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
19 Hb_000209_110 0.3431593419 - - PREDICTED: receptor-like protein kinase BRI1-like 3 [Jatropha curcas]
20 Hb_001086_030 0.3437294332 - - Disease resistance protein RPS5, putative [Ricinus communis]

Gene co-expression network

sample Hb_010810_110 Hb_010810_110 Hb_001652_040 Hb_001652_040 Hb_010810_110--Hb_001652_040 Hb_004143_120 Hb_004143_120 Hb_010810_110--Hb_004143_120 Hb_002780_060 Hb_002780_060 Hb_010810_110--Hb_002780_060 Hb_002849_160 Hb_002849_160 Hb_010810_110--Hb_002849_160 Hb_016834_010 Hb_016834_010 Hb_010810_110--Hb_016834_010 Hb_002477_220 Hb_002477_220 Hb_010810_110--Hb_002477_220 Hb_004228_040 Hb_004228_040 Hb_001652_040--Hb_004228_040 Hb_099496_010 Hb_099496_010 Hb_001652_040--Hb_099496_010 Hb_001652_040--Hb_002477_220 Hb_108557_010 Hb_108557_010 Hb_001652_040--Hb_108557_010 Hb_157029_010 Hb_157029_010 Hb_001652_040--Hb_157029_010 Hb_000343_100 Hb_000343_100 Hb_004143_120--Hb_000343_100 Hb_182680_010 Hb_182680_010 Hb_004143_120--Hb_182680_010 Hb_003428_100 Hb_003428_100 Hb_004143_120--Hb_003428_100 Hb_005389_190 Hb_005389_190 Hb_004143_120--Hb_005389_190 Hb_002233_040 Hb_002233_040 Hb_004143_120--Hb_002233_040 Hb_000181_020 Hb_000181_020 Hb_004143_120--Hb_000181_020 Hb_000022_170 Hb_000022_170 Hb_002780_060--Hb_000022_170 Hb_000505_100 Hb_000505_100 Hb_002780_060--Hb_000505_100 Hb_000800_110 Hb_000800_110 Hb_002780_060--Hb_000800_110 Hb_000175_120 Hb_000175_120 Hb_002780_060--Hb_000175_120 Hb_005892_020 Hb_005892_020 Hb_002780_060--Hb_005892_020 Hb_000035_010 Hb_000035_010 Hb_002780_060--Hb_000035_010 Hb_001369_230 Hb_001369_230 Hb_002849_160--Hb_001369_230 Hb_000406_190 Hb_000406_190 Hb_002849_160--Hb_000406_190 Hb_001006_010 Hb_001006_010 Hb_002849_160--Hb_001006_010 Hb_007472_080 Hb_007472_080 Hb_002849_160--Hb_007472_080 Hb_002226_050 Hb_002226_050 Hb_002849_160--Hb_002226_050 Hb_002849_160--Hb_002780_060 Hb_020411_010 Hb_020411_010 Hb_016834_010--Hb_020411_010 Hb_002456_020 Hb_002456_020 Hb_016834_010--Hb_002456_020 Hb_000072_040 Hb_000072_040 Hb_016834_010--Hb_000072_040 Hb_001496_140 Hb_001496_140 Hb_016834_010--Hb_001496_140 Hb_092650_010 Hb_092650_010 Hb_016834_010--Hb_092650_010 Hb_002260_260 Hb_002260_260 Hb_016834_010--Hb_002260_260 Hb_000283_150 Hb_000283_150 Hb_002477_220--Hb_000283_150 Hb_007380_040 Hb_007380_040 Hb_002477_220--Hb_007380_040 Hb_000406_060 Hb_000406_060 Hb_002477_220--Hb_000406_060 Hb_002477_220--Hb_000022_170 Hb_003640_030 Hb_003640_030 Hb_002477_220--Hb_003640_030 Hb_001636_020 Hb_001636_020 Hb_002477_220--Hb_001636_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0905752 0.104124 0.0505753 0 0 0.269356
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0752857 0.0592236 0 0.604292 0.245962

CAGE analysis