Hb_000856_060

Information

Type -
Description -
Location Contig856: 44711-45071
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000856_060 0.0 - - -
2 Hb_000245_080 0.1798186476 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-15 [Jatropha curcas]
3 Hb_009557_030 0.1875951247 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-52-like [Jatropha curcas]
4 Hb_000445_470 0.2019029022 - - PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Jatropha curcas]
5 Hb_001255_010 0.2044181334 - - PREDICTED: phytosulfokine receptor 1-like [Tarenaya hassleriana]
6 Hb_001496_130 0.210841891 - - -
7 Hb_004480_020 0.2110749348 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
8 Hb_002869_050 0.2111738201 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
9 Hb_005694_010 0.2134583451 transcription factor TF Family: C2C2-Dof F-box family protein, putative isoform 1 [Theobroma cacao]
10 Hb_000879_150 0.2136487038 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004218_120 0.2150963623 - - PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X1 [Jatropha curcas]
12 Hb_004449_180 0.2168408938 - - PREDICTED: SAC3 family protein 1 [Jatropha curcas]
13 Hb_002983_080 0.2168656092 - - acetylornithine aminotransferase, partial [Prunus persica]
14 Hb_001825_040 0.2169258824 - - myosin XI, putative [Ricinus communis]
15 Hb_005535_080 0.2169328562 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
16 Hb_000074_100 0.2183500066 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000703_100 0.2189207937 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Jatropha curcas]
18 Hb_000656_300 0.2202294178 - - PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Populus euphratica]
19 Hb_124373_010 0.2206960123 - - PREDICTED: BRCA1-A complex subunit BRE isoform X1 [Jatropha curcas]
20 Hb_003975_010 0.2207580068 - - PREDICTED: protein RTF2 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000856_060 Hb_000856_060 Hb_000245_080 Hb_000245_080 Hb_000856_060--Hb_000245_080 Hb_009557_030 Hb_009557_030 Hb_000856_060--Hb_009557_030 Hb_000445_470 Hb_000445_470 Hb_000856_060--Hb_000445_470 Hb_001255_010 Hb_001255_010 Hb_000856_060--Hb_001255_010 Hb_001496_130 Hb_001496_130 Hb_000856_060--Hb_001496_130 Hb_004480_020 Hb_004480_020 Hb_000856_060--Hb_004480_020 Hb_000003_540 Hb_000003_540 Hb_000245_080--Hb_000003_540 Hb_024879_010 Hb_024879_010 Hb_000245_080--Hb_024879_010 Hb_005539_310 Hb_005539_310 Hb_000245_080--Hb_005539_310 Hb_006065_050 Hb_006065_050 Hb_000245_080--Hb_006065_050 Hb_000359_140 Hb_000359_140 Hb_000245_080--Hb_000359_140 Hb_001217_040 Hb_001217_040 Hb_000245_080--Hb_001217_040 Hb_001191_080 Hb_001191_080 Hb_009557_030--Hb_001191_080 Hb_003147_060 Hb_003147_060 Hb_009557_030--Hb_003147_060 Hb_000120_810 Hb_000120_810 Hb_009557_030--Hb_000120_810 Hb_000256_090 Hb_000256_090 Hb_009557_030--Hb_000256_090 Hb_000538_240 Hb_000538_240 Hb_009557_030--Hb_000538_240 Hb_002092_120 Hb_002092_120 Hb_009557_030--Hb_002092_120 Hb_000069_480 Hb_000069_480 Hb_000445_470--Hb_000069_480 Hb_001408_110 Hb_001408_110 Hb_000445_470--Hb_001408_110 Hb_005381_020 Hb_005381_020 Hb_000445_470--Hb_005381_020 Hb_004128_130 Hb_004128_130 Hb_000445_470--Hb_004128_130 Hb_001258_100 Hb_001258_100 Hb_000445_470--Hb_001258_100 Hb_000671_080 Hb_000671_080 Hb_000445_470--Hb_000671_080 Hb_002250_050 Hb_002250_050 Hb_001255_010--Hb_002250_050 Hb_017159_010 Hb_017159_010 Hb_001255_010--Hb_017159_010 Hb_000523_030 Hb_000523_030 Hb_001255_010--Hb_000523_030 Hb_028487_130 Hb_028487_130 Hb_001255_010--Hb_028487_130 Hb_178793_010 Hb_178793_010 Hb_001255_010--Hb_178793_010 Hb_000203_270 Hb_000203_270 Hb_001255_010--Hb_000203_270 Hb_000330_030 Hb_000330_030 Hb_001496_130--Hb_000330_030 Hb_000370_070 Hb_000370_070 Hb_001496_130--Hb_000370_070 Hb_017434_070 Hb_017434_070 Hb_001496_130--Hb_017434_070 Hb_012940_030 Hb_012940_030 Hb_001496_130--Hb_012940_030 Hb_001148_060 Hb_001148_060 Hb_001496_130--Hb_001148_060 Hb_001481_150 Hb_001481_150 Hb_004480_020--Hb_001481_150 Hb_007286_020 Hb_007286_020 Hb_004480_020--Hb_007286_020 Hb_007137_050 Hb_007137_050 Hb_004480_020--Hb_007137_050 Hb_000023_300 Hb_000023_300 Hb_004480_020--Hb_000023_300 Hb_000085_450 Hb_000085_450 Hb_004480_020--Hb_000085_450 Hb_001097_040 Hb_001097_040 Hb_004480_020--Hb_001097_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.51295 0.684601 0.448837 1.60869 0.325362 0.163624
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.404731 0.638112 0 0.297005 0.483737

CAGE analysis