Hb_000671_080

Information

Type -
Description -
Location Contig671: 91273-93771
Sequence    

Annotation

kegg
ID rcu:RCOM_1035810
description hypothetical protein
nr
ID XP_012067882.1
description PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
swissprot
ID Q9SA00
description 5'-adenylylsulfate reductase-like 4 OS=Arabidopsis thaliana GN=APRL4 PE=2 SV=1
trembl
ID A0A067LB96
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15796 PE=4 SV=1
Gene Ontology
ID GO:0005623
description 5 -adenylylsulfate reductase-like 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53421: 91215-93668 , PASA_asmbl_53422: 92821-93049
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000671_080 0.0 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
2 Hb_001257_100 0.0691580205 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FB isoform X1 [Jatropha curcas]
3 Hb_003599_030 0.0754847704 - - PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X3 [Jatropha curcas]
4 Hb_024650_080 0.0767602846 - - PREDICTED: BTB/POZ domain-containing protein At3g09030 [Jatropha curcas]
5 Hb_000418_010 0.080540247 - - PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Jatropha curcas]
6 Hb_003849_220 0.0827828209 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
7 Hb_000926_150 0.0871844397 - - PREDICTED: splicing factor, suppressor of white-apricot homolog isoform X1 [Jatropha curcas]
8 Hb_044486_020 0.0902943498 - - CASTOR protein [Glycine max]
9 Hb_000802_090 0.0908068495 - - ornithine aminotransferase, putative [Ricinus communis]
10 Hb_000069_480 0.0914397313 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001408_110 0.0916665692 - - hypothetical protein EUGRSUZ_I02762 [Eucalyptus grandis]
12 Hb_005288_140 0.0929744869 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Jatropha curcas]
13 Hb_000445_470 0.0952264033 - - PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Jatropha curcas]
14 Hb_002869_050 0.0988161535 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
15 Hb_001329_200 0.0996012773 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 1 [Jatropha curcas]
16 Hb_001328_080 0.1004094205 - - PREDICTED: importin subunit alpha-1b [Jatropha curcas]
17 Hb_011360_050 0.1008371092 - - PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]
18 Hb_000705_180 0.1017141167 - - hypothetical protein JCGZ_02923 [Jatropha curcas]
19 Hb_002232_480 0.1020132958 - - PREDICTED: telomerase reverse transcriptase [Jatropha curcas]
20 Hb_000020_160 0.1023166248 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]

Gene co-expression network

sample Hb_000671_080 Hb_000671_080 Hb_001257_100 Hb_001257_100 Hb_000671_080--Hb_001257_100 Hb_003599_030 Hb_003599_030 Hb_000671_080--Hb_003599_030 Hb_024650_080 Hb_024650_080 Hb_000671_080--Hb_024650_080 Hb_000418_010 Hb_000418_010 Hb_000671_080--Hb_000418_010 Hb_003849_220 Hb_003849_220 Hb_000671_080--Hb_003849_220 Hb_000926_150 Hb_000926_150 Hb_000671_080--Hb_000926_150 Hb_001257_100--Hb_000926_150 Hb_026198_060 Hb_026198_060 Hb_001257_100--Hb_026198_060 Hb_002812_010 Hb_002812_010 Hb_001257_100--Hb_002812_010 Hb_000649_250 Hb_000649_250 Hb_001257_100--Hb_000649_250 Hb_002119_090 Hb_002119_090 Hb_001257_100--Hb_002119_090 Hb_000705_180 Hb_000705_180 Hb_003599_030--Hb_000705_180 Hb_003599_030--Hb_001257_100 Hb_001329_200 Hb_001329_200 Hb_003599_030--Hb_001329_200 Hb_009372_020 Hb_009372_020 Hb_003599_030--Hb_009372_020 Hb_009615_160 Hb_009615_160 Hb_003599_030--Hb_009615_160 Hb_001408_110 Hb_001408_110 Hb_024650_080--Hb_001408_110 Hb_016172_030 Hb_016172_030 Hb_024650_080--Hb_016172_030 Hb_022425_030 Hb_022425_030 Hb_024650_080--Hb_022425_030 Hb_000103_290 Hb_000103_290 Hb_024650_080--Hb_000103_290 Hb_024650_080--Hb_000926_150 Hb_000020_160 Hb_000020_160 Hb_024650_080--Hb_000020_160 Hb_000197_030 Hb_000197_030 Hb_000418_010--Hb_000197_030 Hb_000069_480 Hb_000069_480 Hb_000418_010--Hb_000069_480 Hb_000418_010--Hb_001257_100 Hb_001489_100 Hb_001489_100 Hb_000418_010--Hb_001489_100 Hb_006198_020 Hb_006198_020 Hb_000418_010--Hb_006198_020 Hb_003849_220--Hb_001257_100 Hb_000261_280 Hb_000261_280 Hb_003849_220--Hb_000261_280 Hb_000671_030 Hb_000671_030 Hb_003849_220--Hb_000671_030 Hb_005288_140 Hb_005288_140 Hb_003849_220--Hb_005288_140 Hb_003777_130 Hb_003777_130 Hb_003849_220--Hb_003777_130 Hb_116349_130 Hb_116349_130 Hb_000926_150--Hb_116349_130 Hb_000035_100 Hb_000035_100 Hb_000926_150--Hb_000035_100 Hb_000856_300 Hb_000856_300 Hb_000926_150--Hb_000856_300 Hb_000373_170 Hb_000373_170 Hb_000926_150--Hb_000373_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.1409 43.2335 22.4224 38.5989 18.5909 12.1981
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.2675 14.0421 8.31296 19.812 21.0876

CAGE analysis