Hb_003849_220

Information

Type -
Description -
Location Contig3849: 174111-178632
Sequence    

Annotation

kegg
ID tcc:TCM_010537
description NAD(P)-linked oxidoreductase superfamily protein
nr
ID XP_012085535.1
description PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
swissprot
ID Q9SQ64
description Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=COR2 PE=1 SV=1
trembl
ID A0A067JV85
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17856 PE=4 SV=1
Gene Ontology
ID GO:0016491
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38776: 174348-176170 , PASA_asmbl_38777: 174961-176170
cDNA
(Sanger)
(ID:Location)		 018_P04.ab1: 174952-176059 , 041_B06.ab1: 175355-176170

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003849_220 0.0 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
2 Hb_000671_080 0.0827828209 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
3 Hb_001257_100 0.0866144181 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FB isoform X1 [Jatropha curcas]
4 Hb_000261_280 0.0892943631 - - BnaA10g23810D [Brassica napus]
5 Hb_000671_030 0.0898110242 - - PREDICTED: probable pectin methyltransferase QUA2 [Jatropha curcas]
6 Hb_005288_140 0.0909822893 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Jatropha curcas]
7 Hb_003777_130 0.0962375452 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
8 Hb_001259_110 0.0976684101 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 [Jatropha curcas]
9 Hb_001675_320 0.0979617767 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
10 Hb_001911_010 0.0981949451 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
11 Hb_152910_010 0.0983439393 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
12 Hb_000705_180 0.099644525 - - hypothetical protein JCGZ_02923 [Jatropha curcas]
13 Hb_003599_030 0.0998129707 - - PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X3 [Jatropha curcas]
14 Hb_004319_050 0.1006845207 - - PREDICTED: senescence-associated carboxylesterase 101-like [Populus euphratica]
15 Hb_005403_010 0.1012357164 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
16 Hb_003018_030 0.102816399 - - PREDICTED: GDP-mannose 4,6 dehydratase 1 [Jatropha curcas]
17 Hb_000856_300 0.1030951599 - - PREDICTED: uncharacterized protein LOC105640498 [Jatropha curcas]
18 Hb_001103_090 0.1051763666 - - PREDICTED: patellin-3 [Populus euphratica]
19 Hb_000803_180 0.1063589008 - - hexokinase [Manihot esculenta]
20 Hb_000418_010 0.1072303418 - - PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_003849_220 Hb_003849_220 Hb_000671_080 Hb_000671_080 Hb_003849_220--Hb_000671_080 Hb_001257_100 Hb_001257_100 Hb_003849_220--Hb_001257_100 Hb_000261_280 Hb_000261_280 Hb_003849_220--Hb_000261_280 Hb_000671_030 Hb_000671_030 Hb_003849_220--Hb_000671_030 Hb_005288_140 Hb_005288_140 Hb_003849_220--Hb_005288_140 Hb_003777_130 Hb_003777_130 Hb_003849_220--Hb_003777_130 Hb_000671_080--Hb_001257_100 Hb_003599_030 Hb_003599_030 Hb_000671_080--Hb_003599_030 Hb_024650_080 Hb_024650_080 Hb_000671_080--Hb_024650_080 Hb_000418_010 Hb_000418_010 Hb_000671_080--Hb_000418_010 Hb_000926_150 Hb_000926_150 Hb_000671_080--Hb_000926_150 Hb_001257_100--Hb_000926_150 Hb_026198_060 Hb_026198_060 Hb_001257_100--Hb_026198_060 Hb_002812_010 Hb_002812_010 Hb_001257_100--Hb_002812_010 Hb_000649_250 Hb_000649_250 Hb_001257_100--Hb_000649_250 Hb_002119_090 Hb_002119_090 Hb_001257_100--Hb_002119_090 Hb_000803_180 Hb_000803_180 Hb_000261_280--Hb_000803_180 Hb_000418_050 Hb_000418_050 Hb_000261_280--Hb_000418_050 Hb_000261_280--Hb_003777_130 Hb_000796_120 Hb_000796_120 Hb_000261_280--Hb_000796_120 Hb_033152_090 Hb_033152_090 Hb_000261_280--Hb_033152_090 Hb_004319_050 Hb_004319_050 Hb_000261_280--Hb_004319_050 Hb_000671_030--Hb_003777_130 Hb_012760_030 Hb_012760_030 Hb_000671_030--Hb_012760_030 Hb_001623_110 Hb_001623_110 Hb_000671_030--Hb_001623_110 Hb_017948_030 Hb_017948_030 Hb_000671_030--Hb_017948_030 Hb_007919_110 Hb_007919_110 Hb_000671_030--Hb_007919_110 Hb_005288_140--Hb_004319_050 Hb_000866_450 Hb_000866_450 Hb_005288_140--Hb_000866_450 Hb_005288_140--Hb_026198_060 Hb_000174_150 Hb_000174_150 Hb_005288_140--Hb_000174_150 Hb_005403_010 Hb_005403_010 Hb_005288_140--Hb_005403_010 Hb_005288_140--Hb_033152_090 Hb_000258_420 Hb_000258_420 Hb_003777_130--Hb_000258_420 Hb_000815_310 Hb_000815_310 Hb_003777_130--Hb_000815_310 Hb_004375_110 Hb_004375_110 Hb_003777_130--Hb_004375_110 Hb_003777_130--Hb_033152_090 Hb_000640_190 Hb_000640_190 Hb_003777_130--Hb_000640_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.08308 10.5213 6.91852 8.60851 4.26656 2.38916
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.1674 1.96698 1.18903 5.00439 4.37585

CAGE analysis