Hb_005381_020

Information

Type -
Description -
Location Contig5381: 68455-70567
Sequence    

Annotation

kegg
ID rcu:RCOM_0835630
description hypothetical protein
nr
ID XP_012067615.1
description PREDICTED: uncharacterized protein LOC105630417 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYD9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15584 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47713: 65825-70525
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005381_020 0.0 - - PREDICTED: uncharacterized protein LOC105630417 [Jatropha curcas]
2 Hb_000046_570 0.060929284 - - hypothetical protein JCGZ_01998 [Jatropha curcas]
3 Hb_007062_040 0.0685000456 - - ADP-ribosylation factor GTPase-activating protein AGD2 [Morus notabilis]
4 Hb_000390_250 0.0718993833 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
5 Hb_000635_040 0.0784102092 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
6 Hb_001366_090 0.0784403227 transcription factor TF Family: NAC hypothetical protein RCOM_1341380 [Ricinus communis]
7 Hb_002311_380 0.079276683 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
8 Hb_001405_210 0.0818781287 - - hypothetical protein JCGZ_22540 [Jatropha curcas]
9 Hb_000890_030 0.0821225057 - - plastid CUL1 [Hevea brasiliensis]
10 Hb_003929_170 0.0823145167 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
11 Hb_001856_180 0.0883818613 - - PREDICTED: eukaryotic translation initiation factor 3 subunit M [Jatropha curcas]
12 Hb_005535_080 0.0892690584 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
13 Hb_044486_020 0.0897982801 - - CASTOR protein [Glycine max]
14 Hb_000958_080 0.0902408492 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000445_470 0.0913807721 - - PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Jatropha curcas]
16 Hb_007248_030 0.0916780118 - - PREDICTED: uncharacterized protein LOC105633558 [Jatropha curcas]
17 Hb_004586_060 0.0917023355 - - PREDICTED: AP-4 complex subunit mu [Jatropha curcas]
18 Hb_002983_080 0.0919360419 - - acetylornithine aminotransferase, partial [Prunus persica]
19 Hb_003912_040 0.0926875072 - - hypothetical protein CISIN_1g005153mg [Citrus sinensis]
20 Hb_000580_030 0.093580706 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]

Gene co-expression network

sample Hb_005381_020 Hb_005381_020 Hb_000046_570 Hb_000046_570 Hb_005381_020--Hb_000046_570 Hb_007062_040 Hb_007062_040 Hb_005381_020--Hb_007062_040 Hb_000390_250 Hb_000390_250 Hb_005381_020--Hb_000390_250 Hb_000635_040 Hb_000635_040 Hb_005381_020--Hb_000635_040 Hb_001366_090 Hb_001366_090 Hb_005381_020--Hb_001366_090 Hb_002311_380 Hb_002311_380 Hb_005381_020--Hb_002311_380 Hb_000046_570--Hb_007062_040 Hb_004586_060 Hb_004586_060 Hb_000046_570--Hb_004586_060 Hb_007248_030 Hb_007248_030 Hb_000046_570--Hb_007248_030 Hb_000046_570--Hb_000390_250 Hb_001405_210 Hb_001405_210 Hb_000046_570--Hb_001405_210 Hb_003912_040 Hb_003912_040 Hb_000046_570--Hb_003912_040 Hb_032990_010 Hb_032990_010 Hb_007062_040--Hb_032990_010 Hb_007062_040--Hb_004586_060 Hb_001856_180 Hb_001856_180 Hb_007062_040--Hb_001856_180 Hb_007062_040--Hb_001405_210 Hb_005460_050 Hb_005460_050 Hb_007062_040--Hb_005460_050 Hb_000329_230 Hb_000329_230 Hb_000390_250--Hb_000329_230 Hb_001863_360 Hb_001863_360 Hb_000390_250--Hb_001863_360 Hb_003929_170 Hb_003929_170 Hb_000390_250--Hb_003929_170 Hb_000390_250--Hb_001366_090 Hb_007800_020 Hb_007800_020 Hb_000635_040--Hb_007800_020 Hb_000130_420 Hb_000130_420 Hb_000635_040--Hb_000130_420 Hb_000635_040--Hb_000046_570 Hb_000362_170 Hb_000362_170 Hb_000635_040--Hb_000362_170 Hb_000567_190 Hb_000567_190 Hb_000635_040--Hb_000567_190 Hb_008226_090 Hb_008226_090 Hb_000635_040--Hb_008226_090 Hb_006573_040 Hb_006573_040 Hb_001366_090--Hb_006573_040 Hb_002232_480 Hb_002232_480 Hb_001366_090--Hb_002232_480 Hb_004994_240 Hb_004994_240 Hb_001366_090--Hb_004994_240 Hb_001366_090--Hb_004586_060 Hb_001366_090--Hb_000046_570 Hb_000236_490 Hb_000236_490 Hb_001366_090--Hb_000236_490 Hb_000958_080 Hb_000958_080 Hb_002311_380--Hb_000958_080 Hb_002311_380--Hb_000046_570 Hb_002311_380--Hb_001366_090 Hb_002311_380--Hb_003929_170 Hb_002311_380--Hb_000635_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.5146 14.8665 15.6427 21.0981 7.61223 10.0291
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.14991 8.3855 5.03579 8.32252 9.10863

CAGE analysis