Hb_001863_360

Information

Type -
Description -
Location Contig1863: 324713-327421
Sequence    

Annotation

kegg
ID rcu:RCOM_1035810
description hypothetical protein
nr
ID XP_012067882.1
description PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
swissprot
ID Q9SA00
description 5'-adenylylsulfate reductase-like 4 OS=Arabidopsis thaliana GN=APRL4 PE=2 SV=1
trembl
ID A0A067LB96
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15796 PE=4 SV=1
Gene Ontology
ID GO:0005623
description 5 -adenylylsulfate reductase-like 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18363: 325076-327384
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_360 0.0 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
2 Hb_000390_250 0.0674355642 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
3 Hb_001257_030 0.0708057677 - - PREDICTED: serine/threonine-protein kinase Nek5 [Jatropha curcas]
4 Hb_005214_140 0.0722203165 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
5 Hb_000103_340 0.0743749449 - - PREDICTED: uncharacterized protein LOC105632051 isoform X4 [Jatropha curcas]
6 Hb_000856_040 0.0804968879 transcription factor TF Family: DDT PREDICTED: uncharacterized protein LOC105640470 [Jatropha curcas]
7 Hb_003498_080 0.0813634538 - - PREDICTED: decapping 5-like protein isoform X2 [Jatropha curcas]
8 Hb_001329_250 0.0822625011 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105642692 isoform X1 [Jatropha curcas]
9 Hb_000317_040 0.0832217636 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
10 Hb_002326_040 0.0836917694 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0723500-like [Jatropha curcas]
11 Hb_001699_010 0.0854208344 - - drought-inducible protein [Manihot esculenta]
12 Hb_011310_110 0.0854349736 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
13 Hb_000212_420 0.0862824135 - - PREDICTED: probable protein phosphatase 2C 33 [Jatropha curcas]
14 Hb_001717_010 0.086556149 - - F-box and wd40 domain protein, putative [Ricinus communis]
15 Hb_010407_060 0.0875869829 - - PREDICTED: probable methyltransferase PMT3 [Jatropha curcas]
16 Hb_001761_120 0.0877587845 - - hypothetical protein JCGZ_22564 [Jatropha curcas]
17 Hb_001087_030 0.0878078001 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
18 Hb_004994_240 0.0880975307 - - hypothetical protein PRUPE_ppa004633mg [Prunus persica]
19 Hb_006120_050 0.0882760301 - - PREDICTED: importin subunit alpha-4-like [Jatropha curcas]
20 Hb_000703_190 0.0894187092 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001863_360 Hb_001863_360 Hb_000390_250 Hb_000390_250 Hb_001863_360--Hb_000390_250 Hb_001257_030 Hb_001257_030 Hb_001863_360--Hb_001257_030 Hb_005214_140 Hb_005214_140 Hb_001863_360--Hb_005214_140 Hb_000103_340 Hb_000103_340 Hb_001863_360--Hb_000103_340 Hb_000856_040 Hb_000856_040 Hb_001863_360--Hb_000856_040 Hb_003498_080 Hb_003498_080 Hb_001863_360--Hb_003498_080 Hb_000046_570 Hb_000046_570 Hb_000390_250--Hb_000046_570 Hb_000329_230 Hb_000329_230 Hb_000390_250--Hb_000329_230 Hb_005381_020 Hb_005381_020 Hb_000390_250--Hb_005381_020 Hb_003929_170 Hb_003929_170 Hb_000390_250--Hb_003929_170 Hb_001366_090 Hb_001366_090 Hb_000390_250--Hb_001366_090 Hb_001257_030--Hb_005214_140 Hb_000739_180 Hb_000739_180 Hb_001257_030--Hb_000739_180 Hb_001257_030--Hb_000856_040 Hb_001817_170 Hb_001817_170 Hb_001257_030--Hb_001817_170 Hb_010407_060 Hb_010407_060 Hb_001257_030--Hb_010407_060 Hb_000270_190 Hb_000270_190 Hb_005214_140--Hb_000270_190 Hb_004044_050 Hb_004044_050 Hb_005214_140--Hb_004044_050 Hb_005214_140--Hb_001817_170 Hb_001329_250 Hb_001329_250 Hb_005214_140--Hb_001329_250 Hb_005214_140--Hb_000103_340 Hb_000214_050 Hb_000214_050 Hb_000103_340--Hb_000214_050 Hb_000635_090 Hb_000635_090 Hb_000103_340--Hb_000635_090 Hb_001018_090 Hb_001018_090 Hb_000103_340--Hb_001018_090 Hb_006275_020 Hb_006275_020 Hb_000103_340--Hb_006275_020 Hb_170416_010 Hb_170416_010 Hb_000103_340--Hb_170416_010 Hb_002071_070 Hb_002071_070 Hb_000856_040--Hb_002071_070 Hb_001300_010 Hb_001300_010 Hb_000856_040--Hb_001300_010 Hb_003058_260 Hb_003058_260 Hb_000856_040--Hb_003058_260 Hb_012632_010 Hb_012632_010 Hb_000856_040--Hb_012632_010 Hb_105105_010 Hb_105105_010 Hb_000856_040--Hb_105105_010 Hb_004994_240 Hb_004994_240 Hb_000856_040--Hb_004994_240 Hb_003498_080--Hb_001329_250 Hb_000212_420 Hb_000212_420 Hb_003498_080--Hb_000212_420 Hb_001776_020 Hb_001776_020 Hb_003498_080--Hb_001776_020 Hb_001481_060 Hb_001481_060 Hb_003498_080--Hb_001481_060 Hb_003040_050 Hb_003040_050 Hb_003498_080--Hb_003040_050 Hb_012114_100 Hb_012114_100 Hb_003498_080--Hb_012114_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.2783 44.3453 49.7221 58.9264 23.5007 27.1884
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.6865 22.3593 36.6179 23.0675 39.8208

CAGE analysis