Hb_001257_030

Information

Type -
Description -
Location Contig1257: 55427-61748
Sequence    

Annotation

kegg
ID rcu:RCOM_1282950
description ATP binding protein, putative (EC:2.7.11.1)
nr
ID XP_012079651.1
description PREDICTED: serine/threonine-protein kinase Nek5 [Jatropha curcas]
swissprot
ID Q0WPH8
description Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1
trembl
ID B9SD11
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_1282950 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase nek5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07840: 55497-61954
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001257_030 0.0 - - PREDICTED: serine/threonine-protein kinase Nek5 [Jatropha curcas]
2 Hb_005214_140 0.0605819109 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
3 Hb_000739_180 0.0697757336 - - PREDICTED: uncharacterized protein LOC105643110 [Jatropha curcas]
4 Hb_001863_360 0.0708057677 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
5 Hb_000856_040 0.0711076145 transcription factor TF Family: DDT PREDICTED: uncharacterized protein LOC105640470 [Jatropha curcas]
6 Hb_001817_170 0.0734782474 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
7 Hb_010407_060 0.0737292515 - - PREDICTED: probable methyltransferase PMT3 [Jatropha curcas]
8 Hb_000120_910 0.0759604947 - - plant ubiquilin, putative [Ricinus communis]
9 Hb_004044_050 0.0771481014 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Jatropha curcas]
10 Hb_001699_010 0.0775337383 - - drought-inducible protein [Manihot esculenta]
11 Hb_000510_360 0.0782300739 transcription factor TF Family: GNAT PREDICTED: histone acetyltransferase GCN5 [Jatropha curcas]
12 Hb_001579_330 0.0798661005 - - PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like isoform X2 [Jatropha curcas]
13 Hb_121089_030 0.0800866683 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
14 Hb_000017_230 0.0819848065 - - hypothetical protein JCGZ_20558 [Jatropha curcas]
15 Hb_003758_010 0.0821012535 transcription factor TF Family: VOZ PREDICTED: transcription factor VOZ1 isoform X1 [Jatropha curcas]
16 Hb_002811_270 0.0829216529 - - PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Jatropha curcas]
17 Hb_000085_170 0.083143935 - - PREDICTED: transcription initiation factor TFIID subunit 6-like isoform X1 [Jatropha curcas]
18 Hb_002326_040 0.0832479047 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0723500-like [Jatropha curcas]
19 Hb_004994_240 0.0840911843 - - hypothetical protein PRUPE_ppa004633mg [Prunus persica]
20 Hb_000214_050 0.0845648243 - - PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001257_030 Hb_001257_030 Hb_005214_140 Hb_005214_140 Hb_001257_030--Hb_005214_140 Hb_000739_180 Hb_000739_180 Hb_001257_030--Hb_000739_180 Hb_001863_360 Hb_001863_360 Hb_001257_030--Hb_001863_360 Hb_000856_040 Hb_000856_040 Hb_001257_030--Hb_000856_040 Hb_001817_170 Hb_001817_170 Hb_001257_030--Hb_001817_170 Hb_010407_060 Hb_010407_060 Hb_001257_030--Hb_010407_060 Hb_000270_190 Hb_000270_190 Hb_005214_140--Hb_000270_190 Hb_004044_050 Hb_004044_050 Hb_005214_140--Hb_004044_050 Hb_005214_140--Hb_001817_170 Hb_001329_250 Hb_001329_250 Hb_005214_140--Hb_001329_250 Hb_000103_340 Hb_000103_340 Hb_005214_140--Hb_000103_340 Hb_000120_910 Hb_000120_910 Hb_000739_180--Hb_000120_910 Hb_085742_010 Hb_085742_010 Hb_000739_180--Hb_085742_010 Hb_009083_070 Hb_009083_070 Hb_000739_180--Hb_009083_070 Hb_002276_240 Hb_002276_240 Hb_000739_180--Hb_002276_240 Hb_008247_020 Hb_008247_020 Hb_000739_180--Hb_008247_020 Hb_000390_250 Hb_000390_250 Hb_001863_360--Hb_000390_250 Hb_001863_360--Hb_005214_140 Hb_001863_360--Hb_000103_340 Hb_001863_360--Hb_000856_040 Hb_003498_080 Hb_003498_080 Hb_001863_360--Hb_003498_080 Hb_002071_070 Hb_002071_070 Hb_000856_040--Hb_002071_070 Hb_001300_010 Hb_001300_010 Hb_000856_040--Hb_001300_010 Hb_003058_260 Hb_003058_260 Hb_000856_040--Hb_003058_260 Hb_012632_010 Hb_012632_010 Hb_000856_040--Hb_012632_010 Hb_105105_010 Hb_105105_010 Hb_000856_040--Hb_105105_010 Hb_004994_240 Hb_004994_240 Hb_000856_040--Hb_004994_240 Hb_003758_010 Hb_003758_010 Hb_001817_170--Hb_003758_010 Hb_006189_020 Hb_006189_020 Hb_001817_170--Hb_006189_020 Hb_002042_050 Hb_002042_050 Hb_001817_170--Hb_002042_050 Hb_003626_070 Hb_003626_070 Hb_001817_170--Hb_003626_070 Hb_001817_170--Hb_002071_070 Hb_000139_080 Hb_000139_080 Hb_001817_170--Hb_000139_080 Hb_008937_010 Hb_008937_010 Hb_010407_060--Hb_008937_010 Hb_010407_060--Hb_000120_910 Hb_010407_060--Hb_004044_050 Hb_027654_020 Hb_027654_020 Hb_010407_060--Hb_027654_020 Hb_022425_030 Hb_022425_030 Hb_010407_060--Hb_022425_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.7471 14.739 15.9421 16.2018 8.70275 7.13513
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.64535 4.99822 10.1767 10.7427 12.4277

CAGE analysis