Hb_003758_010

Information

Type transcription factor
Description TF Family: VOZ
Location Contig3758: 9878-14333
Sequence    

Annotation

kegg
ID pop:POPTR_0019s12260g
description POPTRDRAFT_574371; hypothetical protein
nr
ID XP_012079019.1
description PREDICTED: transcription factor VOZ1 isoform X1 [Jatropha curcas]
swissprot
ID Q9SGQ0
description Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=1
trembl
ID A0A067KIX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12220 PE=4 SV=1
Gene Ontology
ID GO:0048518
description transcription factor voz1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38341: 10102-10716 , PASA_asmbl_38342: 11095-13295
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003758_010 0.0 transcription factor TF Family: VOZ PREDICTED: transcription factor VOZ1 isoform X1 [Jatropha curcas]
2 Hb_001817_170 0.0468744969 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
3 Hb_000510_360 0.0521408219 transcription factor TF Family: GNAT PREDICTED: histone acetyltransferase GCN5 [Jatropha curcas]
4 Hb_027506_010 0.0589880327 - - PREDICTED: cullin-4 [Jatropha curcas]
5 Hb_033312_040 0.0610618853 - - PREDICTED: gamma-tubulin complex component 5-like isoform X1 [Jatropha curcas]
6 Hb_000206_160 0.0627536227 - - PREDICTED: TBCC domain-containing protein 1 [Jatropha curcas]
7 Hb_006189_020 0.0631383703 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
8 Hb_002071_070 0.0669150916 transcription factor TF Family: RB conserved hypothetical protein [Ricinus communis]
9 Hb_001488_020 0.0680030148 - - PREDICTED: probable mitochondrial-processing peptidase subunit beta [Jatropha curcas]
10 Hb_060980_010 0.0690731315 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Populus euphratica]
11 Hb_000085_170 0.0703226648 - - PREDICTED: transcription initiation factor TFIID subunit 6-like isoform X1 [Jatropha curcas]
12 Hb_073171_070 0.0715010132 - - PREDICTED: RNA polymerase II-associated factor 1 homolog [Jatropha curcas]
13 Hb_000270_190 0.0717945261 transcription factor TF Family: DDT tRNA ligase, putative [Ricinus communis]
14 Hb_002042_050 0.0722640016 - - PREDICTED: uncharacterized protein LOC105647554 isoform X1 [Jatropha curcas]
15 Hb_004324_360 0.0723354517 - - PREDICTED: uncharacterized protein LOC105650600 isoform X1 [Jatropha curcas]
16 Hb_000321_140 0.0724202828 - - RNA-binding protein, putative [Ricinus communis]
17 Hb_065500_020 0.0726342785 - - Exocyst complex component sec3A isoform 1 [Theobroma cacao]
18 Hb_000476_060 0.0730296825 - - Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao]
19 Hb_003626_070 0.0754873141 - - PREDICTED: golgin candidate 1 [Jatropha curcas]
20 Hb_000103_290 0.0755665256 - - PREDICTED: dymeclin isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003758_010 Hb_003758_010 Hb_001817_170 Hb_001817_170 Hb_003758_010--Hb_001817_170 Hb_000510_360 Hb_000510_360 Hb_003758_010--Hb_000510_360 Hb_027506_010 Hb_027506_010 Hb_003758_010--Hb_027506_010 Hb_033312_040 Hb_033312_040 Hb_003758_010--Hb_033312_040 Hb_000206_160 Hb_000206_160 Hb_003758_010--Hb_000206_160 Hb_006189_020 Hb_006189_020 Hb_003758_010--Hb_006189_020 Hb_001817_170--Hb_006189_020 Hb_002042_050 Hb_002042_050 Hb_001817_170--Hb_002042_050 Hb_003626_070 Hb_003626_070 Hb_001817_170--Hb_003626_070 Hb_002071_070 Hb_002071_070 Hb_001817_170--Hb_002071_070 Hb_000139_080 Hb_000139_080 Hb_001817_170--Hb_000139_080 Hb_000085_170 Hb_000085_170 Hb_000510_360--Hb_000085_170 Hb_000510_360--Hb_033312_040 Hb_000510_360--Hb_006189_020 Hb_000321_140 Hb_000321_140 Hb_000510_360--Hb_000321_140 Hb_000510_360--Hb_001817_170 Hb_060980_010 Hb_060980_010 Hb_027506_010--Hb_060980_010 Hb_016172_030 Hb_016172_030 Hb_027506_010--Hb_016172_030 Hb_027506_010--Hb_000206_160 Hb_000409_050 Hb_000409_050 Hb_027506_010--Hb_000409_050 Hb_065500_020 Hb_065500_020 Hb_027506_010--Hb_065500_020 Hb_033312_040--Hb_006189_020 Hb_001481_060 Hb_001481_060 Hb_033312_040--Hb_001481_060 Hb_033312_040--Hb_000139_080 Hb_004333_040 Hb_004333_040 Hb_033312_040--Hb_004333_040 Hb_003098_070 Hb_003098_070 Hb_033312_040--Hb_003098_070 Hb_000676_330 Hb_000676_330 Hb_000206_160--Hb_000676_330 Hb_005701_050 Hb_005701_050 Hb_000206_160--Hb_005701_050 Hb_000996_020 Hb_000996_020 Hb_000206_160--Hb_000996_020 Hb_000373_170 Hb_000373_170 Hb_000206_160--Hb_000373_170 Hb_006189_020--Hb_000409_050 Hb_006189_020--Hb_004333_040 Hb_006189_020--Hb_000139_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.73267 5.4145 6.90038 5.52504 4.027 2.85104
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.67856 2.4641 4.24503 5.8386 6.14537

CAGE analysis