Hb_000256_090

Information

Type -
Description -
Location Contig256: 150959-152137
Sequence    

Annotation

kegg
ID pop:POPTR_0018s02290g
description POPTRDRAFT_261261; hypothetical protein
nr
ID XP_012076462.1
description PREDICTED: uncharacterized protein LOC105637579 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KP02
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07110 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000256_090 0.0 - - PREDICTED: uncharacterized protein LOC105637579 [Jatropha curcas]
2 Hb_026048_110 0.0765517246 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
3 Hb_000230_460 0.1002135445 - - Speckle-type POZ protein, putative [Ricinus communis]
4 Hb_000003_680 0.1077288531 transcription factor TF Family: MYB-related PREDICTED: myb-like protein H [Jatropha curcas]
5 Hb_005563_070 0.11065269 - - PREDICTED: uncharacterized protein LOC105630108 [Jatropha curcas]
6 Hb_001178_010 0.1175902023 - - PREDICTED: uncharacterized protein LOC105629461 [Jatropha curcas]
7 Hb_001191_080 0.1181057147 - - protein with unknown function [Ricinus communis]
8 Hb_002572_020 0.1185549261 transcription factor TF Family: SBP hypothetical protein POPTR_0005s28010g [Populus trichocarpa]
9 Hb_003147_060 0.1186192298 - - syntaxin, plant, putative [Ricinus communis]
10 Hb_000137_010 0.1190536529 - - PREDICTED: uncharacterized protein LOC105644349 [Jatropha curcas]
11 Hb_000603_160 0.1193817996 - - PREDICTED: fatty-acid-binding protein 2 [Jatropha curcas]
12 Hb_021576_150 0.1200653322 - - PREDICTED: formin-like protein 18 [Jatropha curcas]
13 Hb_000926_200 0.1206040197 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein RCD1 homolog isoform X1 [Jatropha curcas]
14 Hb_002435_100 0.12168146 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Jatropha curcas]
15 Hb_005162_090 0.1224480368 - - PREDICTED: uncharacterized protein LOC105648425 [Jatropha curcas]
16 Hb_000537_100 0.123375227 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
17 Hb_003925_040 0.1237165373 transcription factor TF Family: C2H2 PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Jatropha curcas]
18 Hb_000680_120 0.1238472648 - - PREDICTED: uncharacterized protein LOC105631461 [Jatropha curcas]
19 Hb_001160_100 0.12399393 - - PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic [Jatropha curcas]
20 Hb_000738_020 0.1270962092 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000256_090 Hb_000256_090 Hb_026048_110 Hb_026048_110 Hb_000256_090--Hb_026048_110 Hb_000230_460 Hb_000230_460 Hb_000256_090--Hb_000230_460 Hb_000003_680 Hb_000003_680 Hb_000256_090--Hb_000003_680 Hb_005563_070 Hb_005563_070 Hb_000256_090--Hb_005563_070 Hb_001178_010 Hb_001178_010 Hb_000256_090--Hb_001178_010 Hb_001191_080 Hb_001191_080 Hb_000256_090--Hb_001191_080 Hb_001717_010 Hb_001717_010 Hb_026048_110--Hb_001717_010 Hb_005162_090 Hb_005162_090 Hb_026048_110--Hb_005162_090 Hb_010872_070 Hb_010872_070 Hb_026048_110--Hb_010872_070 Hb_026048_110--Hb_005563_070 Hb_006275_020 Hb_006275_020 Hb_026048_110--Hb_006275_020 Hb_178968_060 Hb_178968_060 Hb_000230_460--Hb_178968_060 Hb_002435_100 Hb_002435_100 Hb_000230_460--Hb_002435_100 Hb_000176_020 Hb_000176_020 Hb_000230_460--Hb_000176_020 Hb_000137_010 Hb_000137_010 Hb_000230_460--Hb_000137_010 Hb_007254_020 Hb_007254_020 Hb_000230_460--Hb_007254_020 Hb_000160_140 Hb_000160_140 Hb_000230_460--Hb_000160_140 Hb_012286_020 Hb_012286_020 Hb_000003_680--Hb_012286_020 Hb_000787_080 Hb_000787_080 Hb_000003_680--Hb_000787_080 Hb_087313_010 Hb_087313_010 Hb_000003_680--Hb_087313_010 Hb_021576_150 Hb_021576_150 Hb_000003_680--Hb_021576_150 Hb_002218_020 Hb_002218_020 Hb_000003_680--Hb_002218_020 Hb_102948_010 Hb_102948_010 Hb_000003_680--Hb_102948_010 Hb_000603_160 Hb_000603_160 Hb_005563_070--Hb_000603_160 Hb_189216_010 Hb_189216_010 Hb_005563_070--Hb_189216_010 Hb_000704_030 Hb_000704_030 Hb_005563_070--Hb_000704_030 Hb_001141_420 Hb_001141_420 Hb_005563_070--Hb_001141_420 Hb_005563_070--Hb_005162_090 Hb_002572_020 Hb_002572_020 Hb_005563_070--Hb_002572_020 Hb_014497_100 Hb_014497_100 Hb_001178_010--Hb_014497_100 Hb_000537_100 Hb_000537_100 Hb_001178_010--Hb_000537_100 Hb_002316_140 Hb_002316_140 Hb_001178_010--Hb_002316_140 Hb_004129_090 Hb_004129_090 Hb_001178_010--Hb_004129_090 Hb_001900_140 Hb_001900_140 Hb_001178_010--Hb_001900_140 Hb_000926_200 Hb_000926_200 Hb_001178_010--Hb_000926_200 Hb_007741_130 Hb_007741_130 Hb_001191_080--Hb_007741_130 Hb_004712_190 Hb_004712_190 Hb_001191_080--Hb_004712_190 Hb_001191_080--Hb_021576_150 Hb_001191_080--Hb_000926_200 Hb_014231_020 Hb_014231_020 Hb_001191_080--Hb_014231_020 Hb_005245_120 Hb_005245_120 Hb_001191_080--Hb_005245_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.6567 27.195 30.4301 24.2108 5.78844 9.26715
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.053 23.4035 12.2979 6.57005 19.4759

CAGE analysis