Hb_000603_160

Information

Type -
Description -
Location Contig603: 155272-160290
Sequence    

Annotation

kegg
ID rcu:RCOM_0707660
description hypothetical protein
nr
ID XP_012077184.1
description PREDICTED: fatty-acid-binding protein 2 [Jatropha curcas]
swissprot
ID Q84RK2
description Fatty-acid-binding protein 2 OS=Arabidopsis thaliana GN=FAP2 PE=2 SV=2
trembl
ID A0A067KG72
description Chalcone-flavonone isomerase family protein OS=Jatropha curcas GN=JCGZ_07589 PE=3 SV=1
Gene Ontology
ID GO:0005504
description fatty-acid-binding protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50653: 155968-156085 , PASA_asmbl_50654: 156112-160345
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000603_160 0.0 - - PREDICTED: fatty-acid-binding protein 2 [Jatropha curcas]
2 Hb_005563_070 0.0440439672 - - PREDICTED: uncharacterized protein LOC105630108 [Jatropha curcas]
3 Hb_002572_020 0.0611701141 transcription factor TF Family: SBP hypothetical protein POPTR_0005s28010g [Populus trichocarpa]
4 Hb_189216_010 0.0644381644 - - PREDICTED: uncharacterized protein LOC105642236 isoform X1 [Jatropha curcas]
5 Hb_000365_270 0.0703977727 - - PREDICTED: uncharacterized protein LOC105649060 [Jatropha curcas]
6 Hb_001141_420 0.0726451762 - - PREDICTED: uncharacterized protein LOC105631978 isoform X1 [Jatropha curcas]
7 Hb_004607_090 0.0749872938 - - PREDICTED: uncharacterized protein LOC105648257 [Jatropha curcas]
8 Hb_053709_050 0.0756350399 - - PREDICTED: nudix hydrolase 23, chloroplastic isoform X2 [Jatropha curcas]
9 Hb_000069_640 0.0787465451 - - PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
10 Hb_003878_090 0.0787789767 - - PREDICTED: polynucleotide 3'-phosphatase ZDP [Jatropha curcas]
11 Hb_000080_130 0.0788820389 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
12 Hb_005162_090 0.0801971951 - - PREDICTED: uncharacterized protein LOC105648425 [Jatropha curcas]
13 Hb_157023_020 0.0832898856 - - nucleic acid binding protein, putative [Ricinus communis]
14 Hb_000699_150 0.0840195826 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
15 Hb_005653_070 0.0848346899 - - K+ transport growth defect-like protein [Hevea brasiliensis]
16 Hb_000120_810 0.0852251842 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
17 Hb_007472_070 0.0855481453 - - cir, putative [Ricinus communis]
18 Hb_000365_230 0.0861076455 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
19 Hb_062226_130 0.0874989761 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Jatropha curcas]
20 Hb_004705_170 0.0878042691 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]

Gene co-expression network

sample Hb_000603_160 Hb_000603_160 Hb_005563_070 Hb_005563_070 Hb_000603_160--Hb_005563_070 Hb_002572_020 Hb_002572_020 Hb_000603_160--Hb_002572_020 Hb_189216_010 Hb_189216_010 Hb_000603_160--Hb_189216_010 Hb_000365_270 Hb_000365_270 Hb_000603_160--Hb_000365_270 Hb_001141_420 Hb_001141_420 Hb_000603_160--Hb_001141_420 Hb_004607_090 Hb_004607_090 Hb_000603_160--Hb_004607_090 Hb_005563_070--Hb_189216_010 Hb_000704_030 Hb_000704_030 Hb_005563_070--Hb_000704_030 Hb_005563_070--Hb_001141_420 Hb_005162_090 Hb_005162_090 Hb_005563_070--Hb_005162_090 Hb_005563_070--Hb_002572_020 Hb_002316_140 Hb_002316_140 Hb_002572_020--Hb_002316_140 Hb_002413_010 Hb_002413_010 Hb_002572_020--Hb_002413_010 Hb_000365_230 Hb_000365_230 Hb_002572_020--Hb_000365_230 Hb_000173_310 Hb_000173_310 Hb_002572_020--Hb_000173_310 Hb_183433_010 Hb_183433_010 Hb_002572_020--Hb_183433_010 Hb_002471_090 Hb_002471_090 Hb_189216_010--Hb_002471_090 Hb_000778_010 Hb_000778_010 Hb_189216_010--Hb_000778_010 Hb_008748_030 Hb_008748_030 Hb_189216_010--Hb_008748_030 Hb_002272_030 Hb_002272_030 Hb_189216_010--Hb_002272_030 Hb_004108_220 Hb_004108_220 Hb_000365_270--Hb_004108_220 Hb_005653_070 Hb_005653_070 Hb_000365_270--Hb_005653_070 Hb_053709_050 Hb_053709_050 Hb_000365_270--Hb_053709_050 Hb_000365_270--Hb_005563_070 Hb_006846_130 Hb_006846_130 Hb_000365_270--Hb_006846_130 Hb_023371_020 Hb_023371_020 Hb_001141_420--Hb_023371_020 Hb_003058_120 Hb_003058_120 Hb_001141_420--Hb_003058_120 Hb_000220_100 Hb_000220_100 Hb_001141_420--Hb_000220_100 Hb_168978_010 Hb_168978_010 Hb_001141_420--Hb_168978_010 Hb_000983_050 Hb_000983_050 Hb_004607_090--Hb_000983_050 Hb_007472_070 Hb_007472_070 Hb_004607_090--Hb_007472_070 Hb_000087_070 Hb_000087_070 Hb_004607_090--Hb_000087_070 Hb_000300_270 Hb_000300_270 Hb_004607_090--Hb_000300_270 Hb_004607_090--Hb_005162_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.15409 8.48256 11.832 13.5875 3.85533 5.08266
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.01436 9.49306 6.2263 6.49176 9.07367

CAGE analysis