Hb_001496_130

Information

Type -
Description -
Location Contig1496: 108962-109736
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001496_130 0.0 - - -
2 Hb_000330_030 0.2029109256 - - PREDICTED: uncharacterized protein LOC105633814 [Jatropha curcas]
3 Hb_000856_060 0.210841891 - - -
4 Hb_000370_070 0.2419930118 - - PREDICTED: subtilisin-like protease-like [Citrus sinensis]
5 Hb_017434_070 0.2448064404 - - transcription factor, putative [Ricinus communis]
6 Hb_012940_030 0.2485130701 - - PREDICTED: uncharacterized protein LOC105639708 [Jatropha curcas]
7 Hb_001148_060 0.2634284852 - - hypothetical protein JCGZ_00278 [Jatropha curcas]
8 Hb_001998_170 0.2653399851 - - BnaC07g08230D [Brassica napus]
9 Hb_040734_010 0.2686866962 - - PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Jatropha curcas]
10 Hb_007793_050 0.2689053162 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001246_120 0.2718413575 - - PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
12 Hb_010098_060 0.273869072 - - PREDICTED: BTB/POZ domain-containing protein At5g17580 [Jatropha curcas]
13 Hb_001946_050 0.274044723 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000189_200 0.2747869869 - - hypothetical protein JCGZ_02242 [Jatropha curcas]
15 Hb_000152_370 0.2755304983 - - PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
16 Hb_009976_010 0.2757115333 - - PREDICTED: uncharacterized protein LOC105630216 [Jatropha curcas]
17 Hb_000221_090 0.2766685199 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
18 Hb_000239_080 0.2774821501 - - hypothetical protein POPTR_0014s01730g [Populus trichocarpa]
19 Hb_000690_150 0.2784216038 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
20 Hb_172632_130 0.278809946 - - hypothetical protein JCGZ_22584 [Jatropha curcas]

Gene co-expression network

sample Hb_001496_130 Hb_001496_130 Hb_000330_030 Hb_000330_030 Hb_001496_130--Hb_000330_030 Hb_000856_060 Hb_000856_060 Hb_001496_130--Hb_000856_060 Hb_000370_070 Hb_000370_070 Hb_001496_130--Hb_000370_070 Hb_017434_070 Hb_017434_070 Hb_001496_130--Hb_017434_070 Hb_012940_030 Hb_012940_030 Hb_001496_130--Hb_012940_030 Hb_001148_060 Hb_001148_060 Hb_001496_130--Hb_001148_060 Hb_003673_040 Hb_003673_040 Hb_000330_030--Hb_003673_040 Hb_012506_070 Hb_012506_070 Hb_000330_030--Hb_012506_070 Hb_000330_030--Hb_000856_060 Hb_000690_150 Hb_000690_150 Hb_000330_030--Hb_000690_150 Hb_050959_010 Hb_050959_010 Hb_000330_030--Hb_050959_010 Hb_000245_080 Hb_000245_080 Hb_000856_060--Hb_000245_080 Hb_009557_030 Hb_009557_030 Hb_000856_060--Hb_009557_030 Hb_000445_470 Hb_000445_470 Hb_000856_060--Hb_000445_470 Hb_001255_010 Hb_001255_010 Hb_000856_060--Hb_001255_010 Hb_004480_020 Hb_004480_020 Hb_000856_060--Hb_004480_020 Hb_000138_060 Hb_000138_060 Hb_000370_070--Hb_000138_060 Hb_116702_010 Hb_116702_010 Hb_000370_070--Hb_116702_010 Hb_000221_090 Hb_000221_090 Hb_000370_070--Hb_000221_090 Hb_000236_160 Hb_000236_160 Hb_000370_070--Hb_000236_160 Hb_028207_060 Hb_028207_060 Hb_000370_070--Hb_028207_060 Hb_007793_050 Hb_007793_050 Hb_000370_070--Hb_007793_050 Hb_001246_120 Hb_001246_120 Hb_017434_070--Hb_001246_120 Hb_002233_070 Hb_002233_070 Hb_017434_070--Hb_002233_070 Hb_017434_070--Hb_000370_070 Hb_017434_070--Hb_001255_010 Hb_001133_010 Hb_001133_010 Hb_017434_070--Hb_001133_010 Hb_001277_040 Hb_001277_040 Hb_017434_070--Hb_001277_040 Hb_000115_080 Hb_000115_080 Hb_012940_030--Hb_000115_080 Hb_000152_370 Hb_000152_370 Hb_012940_030--Hb_000152_370 Hb_002732_030 Hb_002732_030 Hb_012940_030--Hb_002732_030 Hb_005276_060 Hb_005276_060 Hb_012940_030--Hb_005276_060 Hb_059480_010 Hb_059480_010 Hb_012940_030--Hb_059480_010 Hb_001087_030 Hb_001087_030 Hb_012940_030--Hb_001087_030 Hb_002759_100 Hb_002759_100 Hb_001148_060--Hb_002759_100 Hb_005305_120 Hb_005305_120 Hb_001148_060--Hb_005305_120 Hb_172632_130 Hb_172632_130 Hb_001148_060--Hb_172632_130 Hb_021409_070 Hb_021409_070 Hb_001148_060--Hb_021409_070 Hb_000270_830 Hb_000270_830 Hb_001148_060--Hb_000270_830 Hb_001148_060--Hb_007793_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.292609 0.190762 0.113996 0.318038 0.073943 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.172644 0.135604 0 0.0573503 0.244191

CAGE analysis