Hb_001246_120

Information

Type -
Description -
Location Contig1246: 93326-94288
Sequence    

Annotation

kegg
ID pop:POPTR_0002s13640g
description POPTRDRAFT_755053; hypothetical protein
nr
ID XP_012083763.1
description PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JY61
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14682 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001246_120 0.0 - - PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
2 Hb_004917_040 0.1342322082 - - hypothetical protein POPTR_0009s03470g [Populus trichocarpa]
3 Hb_021443_090 0.1454812463 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
4 Hb_000258_370 0.1462231859 - - hypothetical protein [Ricinus communis]
5 Hb_138585_100 0.1484546213 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
6 Hb_006711_070 0.1495690648 - - hypothetical protein RCOM_1336320 [Ricinus communis]
7 Hb_004108_240 0.1515883111 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
8 Hb_001437_010 0.1527690593 - - PREDICTED: probable receptor-like protein kinase At1g33260 [Jatropha curcas]
9 Hb_001500_030 0.1571406945 - - PREDICTED: uncharacterized protein At2g33490 isoform X2 [Jatropha curcas]
10 Hb_000853_220 0.1607715141 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
11 Hb_002071_050 0.1613755875 - - PREDICTED: mitogen-activated protein kinase kinase 5-like [Jatropha curcas]
12 Hb_001268_310 0.1629970109 - - -
13 Hb_012107_010 0.1647003141 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
14 Hb_030116_010 0.1647519846 - - F-box protein, atfbl3, putative [Ricinus communis]
15 Hb_000270_230 0.1656636083 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
16 Hb_010661_010 0.1663187703 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
17 Hb_000671_080 0.1670804331 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
18 Hb_001376_010 0.1687591717 - - diacylglycerol kinase, alpha, putative [Ricinus communis]
19 Hb_003147_060 0.1696496279 - - syntaxin, plant, putative [Ricinus communis]
20 Hb_000608_280 0.1727011774 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001246_120 Hb_001246_120 Hb_004917_040 Hb_004917_040 Hb_001246_120--Hb_004917_040 Hb_021443_090 Hb_021443_090 Hb_001246_120--Hb_021443_090 Hb_000258_370 Hb_000258_370 Hb_001246_120--Hb_000258_370 Hb_138585_100 Hb_138585_100 Hb_001246_120--Hb_138585_100 Hb_006711_070 Hb_006711_070 Hb_001246_120--Hb_006711_070 Hb_004108_240 Hb_004108_240 Hb_001246_120--Hb_004108_240 Hb_002248_130 Hb_002248_130 Hb_004917_040--Hb_002248_130 Hb_000608_280 Hb_000608_280 Hb_004917_040--Hb_000608_280 Hb_003540_250 Hb_003540_250 Hb_004917_040--Hb_003540_250 Hb_004917_040--Hb_021443_090 Hb_005015_080 Hb_005015_080 Hb_004917_040--Hb_005015_080 Hb_001376_010 Hb_001376_010 Hb_004917_040--Hb_001376_010 Hb_001146_020 Hb_001146_020 Hb_021443_090--Hb_001146_020 Hb_021443_090--Hb_005015_080 Hb_000815_240 Hb_000815_240 Hb_021443_090--Hb_000815_240 Hb_000418_010 Hb_000418_010 Hb_021443_090--Hb_000418_010 Hb_000991_040 Hb_000991_040 Hb_021443_090--Hb_000991_040 Hb_006198_020 Hb_006198_020 Hb_021443_090--Hb_006198_020 Hb_000258_370--Hb_138585_100 Hb_002071_050 Hb_002071_050 Hb_000258_370--Hb_002071_050 Hb_000258_370--Hb_006711_070 Hb_000252_210 Hb_000252_210 Hb_000258_370--Hb_000252_210 Hb_003125_030 Hb_003125_030 Hb_000258_370--Hb_003125_030 Hb_006054_030 Hb_006054_030 Hb_000258_370--Hb_006054_030 Hb_138585_100--Hb_006054_030 Hb_138585_100--Hb_002071_050 Hb_138585_100--Hb_000252_210 Hb_138585_100--Hb_006711_070 Hb_000270_230 Hb_000270_230 Hb_138585_100--Hb_000270_230 Hb_000117_060 Hb_000117_060 Hb_006711_070--Hb_000117_060 Hb_003078_030 Hb_003078_030 Hb_006711_070--Hb_003078_030 Hb_000134_340 Hb_000134_340 Hb_006711_070--Hb_000134_340 Hb_005096_010 Hb_005096_010 Hb_006711_070--Hb_005096_010 Hb_006711_070--Hb_021443_090 Hb_124677_040 Hb_124677_040 Hb_004108_240--Hb_124677_040 Hb_000045_260 Hb_000045_260 Hb_004108_240--Hb_000045_260 Hb_003925_040 Hb_003925_040 Hb_004108_240--Hb_003925_040 Hb_004108_240--Hb_001376_010 Hb_003147_060 Hb_003147_060 Hb_004108_240--Hb_003147_060 Hb_004774_020 Hb_004774_020 Hb_004108_240--Hb_004774_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.64944 14.2715 3.9098 7.82647 2.26797 1.77867
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.93119 3.04997 0.767066 1.81631 4.347

CAGE analysis