Hb_001376_010

Information

Type -
Description -
Location Contig1376: 1612-4830
Sequence    

Annotation

kegg
ID rcu:RCOM_1255930
description diacylglycerol kinase, alpha, putative (EC:2.7.1.107)
nr
ID XP_002525776.1
description diacylglycerol kinase, alpha, putative [Ricinus communis]
swissprot
ID Q9C5E5
description Diacylglycerol kinase 5 OS=Arabidopsis thaliana GN=DGK5 PE=2 SV=1
trembl
ID B9SIF7
description Diacylglycerol kinase OS=Ricinus communis GN=RCOM_1255930 PE=3 SV=1
Gene Ontology
ID GO:0016301
description diacylglycerol kinase 5-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10346: 2363-2680 , PASA_asmbl_10347: 2757-2887
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001376_010 0.0 - - diacylglycerol kinase, alpha, putative [Ricinus communis]
2 Hb_000035_050 0.098166347 - - PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas]
3 Hb_000638_280 0.0994517478 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
4 Hb_004117_170 0.1008863509 - - PREDICTED: probable receptor-like protein kinase At3g55450 [Jatropha curcas]
5 Hb_004108_240 0.1009408511 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
6 Hb_002965_050 0.1024261521 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR2 [Jatropha curcas]
7 Hb_000156_090 0.1038420342 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3 isoform X1 [Jatropha curcas]
8 Hb_002900_120 0.1073994183 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Jatropha curcas]
9 Hb_003147_060 0.1089487831 - - syntaxin, plant, putative [Ricinus communis]
10 Hb_000608_280 0.1103541748 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
11 Hb_002686_150 0.1122273378 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
12 Hb_005714_100 0.1129973353 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
13 Hb_001638_030 0.1153983385 desease resistance Gene Name: RPW8 PREDICTED: probable disease resistance protein At4g33300 [Jatropha curcas]
14 Hb_003581_280 0.1154166316 - - KINASE 2B family protein [Populus trichocarpa]
15 Hb_003925_040 0.1182166459 transcription factor TF Family: C2H2 PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Jatropha curcas]
16 Hb_124677_040 0.1183703134 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
17 Hb_001085_300 0.118607948 - - PREDICTED: cyclin-dependent kinase inhibitor 5 [Jatropha curcas]
18 Hb_000699_210 0.1200915545 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
19 Hb_003018_030 0.1202851394 - - PREDICTED: GDP-mannose 4,6 dehydratase 1 [Jatropha curcas]
20 Hb_001195_350 0.1215536636 - - hypothetical protein JCGZ_04423 [Jatropha curcas]

Gene co-expression network

sample Hb_001376_010 Hb_001376_010 Hb_000035_050 Hb_000035_050 Hb_001376_010--Hb_000035_050 Hb_000638_280 Hb_000638_280 Hb_001376_010--Hb_000638_280 Hb_004117_170 Hb_004117_170 Hb_001376_010--Hb_004117_170 Hb_004108_240 Hb_004108_240 Hb_001376_010--Hb_004108_240 Hb_002965_050 Hb_002965_050 Hb_001376_010--Hb_002965_050 Hb_000156_090 Hb_000156_090 Hb_001376_010--Hb_000156_090 Hb_000035_050--Hb_004117_170 Hb_013358_020 Hb_013358_020 Hb_000035_050--Hb_013358_020 Hb_005714_100 Hb_005714_100 Hb_000035_050--Hb_005714_100 Hb_018790_050 Hb_018790_050 Hb_000035_050--Hb_018790_050 Hb_056196_060 Hb_056196_060 Hb_000035_050--Hb_056196_060 Hb_000045_260 Hb_000045_260 Hb_000638_280--Hb_000045_260 Hb_002897_050 Hb_002897_050 Hb_000638_280--Hb_002897_050 Hb_000638_280--Hb_000156_090 Hb_000699_210 Hb_000699_210 Hb_000638_280--Hb_000699_210 Hb_011631_010 Hb_011631_010 Hb_000638_280--Hb_011631_010 Hb_000796_120 Hb_000796_120 Hb_000638_280--Hb_000796_120 Hb_004117_170--Hb_013358_020 Hb_004117_170--Hb_018790_050 Hb_007253_010 Hb_007253_010 Hb_004117_170--Hb_007253_010 Hb_000749_070 Hb_000749_070 Hb_004117_170--Hb_000749_070 Hb_124677_040 Hb_124677_040 Hb_004108_240--Hb_124677_040 Hb_004108_240--Hb_000045_260 Hb_003925_040 Hb_003925_040 Hb_004108_240--Hb_003925_040 Hb_003147_060 Hb_003147_060 Hb_004108_240--Hb_003147_060 Hb_004774_020 Hb_004774_020 Hb_004108_240--Hb_004774_020 Hb_002965_050--Hb_000156_090 Hb_002876_210 Hb_002876_210 Hb_002965_050--Hb_002876_210 Hb_002900_120 Hb_002900_120 Hb_002965_050--Hb_002900_120 Hb_060094_010 Hb_060094_010 Hb_002965_050--Hb_060094_010 Hb_000815_310 Hb_000815_310 Hb_002965_050--Hb_000815_310 Hb_000711_010 Hb_000711_010 Hb_002965_050--Hb_000711_010 Hb_003018_030 Hb_003018_030 Hb_000156_090--Hb_003018_030 Hb_000156_090--Hb_002900_120 Hb_003428_090 Hb_003428_090 Hb_000156_090--Hb_003428_090 Hb_008725_050 Hb_008725_050 Hb_000156_090--Hb_008725_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.45779 25.0151 16.6865 15.6833 2.60302 4.30491
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.76383 5.64275 4.17301 6.49303 5.83894

CAGE analysis