Hb_000815_240

Information

Type -
Description -
Location Contig815: 260775-263455
Sequence    

Annotation

kegg
ID rcu:RCOM_0837610
description Galactoside 2-alpha-L-fucosyltransferase, putative (EC:2.4.1.69)
nr
ID XP_012088036.1
description PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
swissprot
ID Q9SWH5
description Galactoside 2-alpha-L-fucosyltransferase OS=Arabidopsis thaliana GN=FUT1 PE=1 SV=2
trembl
ID B9S905
description Galactoside 2-alpha-L-fucosyltransferase, putative OS=Ricinus communis GN=RCOM_0837610 PE=4 SV=1
Gene Ontology
ID GO:0016020
description galactoside 2-alpha-l-fucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59366: 260773-263180
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_240 0.0 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
2 Hb_000390_250 0.0920779766 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
3 Hb_000991_040 0.0951433019 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
4 Hb_005015_080 0.0955420811 - - PREDICTED: shikimate kinase 1, chloroplastic [Jatropha curcas]
5 Hb_000329_230 0.0955561109 - - PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
6 Hb_000395_040 0.095709686 - - PREDICTED: uncharacterized protein LOC105645576 [Jatropha curcas]
7 Hb_084490_010 0.0973339312 - - PREDICTED: protein root UVB sensitive 6 isoform X2 [Jatropha curcas]
8 Hb_006573_040 0.1010905633 - - DNA binding protein, putative [Ricinus communis]
9 Hb_000802_090 0.1036689214 - - ornithine aminotransferase, putative [Ricinus communis]
10 Hb_007017_040 0.1044529876 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
11 Hb_001140_090 0.1048363017 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002232_480 0.104951794 - - PREDICTED: telomerase reverse transcriptase [Jatropha curcas]
13 Hb_011360_050 0.1063722185 - - PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]
14 Hb_001328_080 0.1070649059 - - PREDICTED: importin subunit alpha-1b [Jatropha curcas]
15 Hb_001454_230 0.107251176 - - PREDICTED: kinesin-13A isoform X1 [Jatropha curcas]
16 Hb_001863_360 0.1089504279 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
17 Hb_000205_240 0.1090829901 - - ubiquitin-protein ligase, putative [Ricinus communis]
18 Hb_013241_010 0.1097346155 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
19 Hb_001366_090 0.1099915722 transcription factor TF Family: NAC hypothetical protein RCOM_1341380 [Ricinus communis]
20 Hb_008937_010 0.1115349388 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000815_240 Hb_000815_240 Hb_000390_250 Hb_000390_250 Hb_000815_240--Hb_000390_250 Hb_000991_040 Hb_000991_040 Hb_000815_240--Hb_000991_040 Hb_005015_080 Hb_005015_080 Hb_000815_240--Hb_005015_080 Hb_000329_230 Hb_000329_230 Hb_000815_240--Hb_000329_230 Hb_000395_040 Hb_000395_040 Hb_000815_240--Hb_000395_040 Hb_084490_010 Hb_084490_010 Hb_000815_240--Hb_084490_010 Hb_000046_570 Hb_000046_570 Hb_000390_250--Hb_000046_570 Hb_000390_250--Hb_000329_230 Hb_001863_360 Hb_001863_360 Hb_000390_250--Hb_001863_360 Hb_005381_020 Hb_005381_020 Hb_000390_250--Hb_005381_020 Hb_003929_170 Hb_003929_170 Hb_000390_250--Hb_003929_170 Hb_001366_090 Hb_001366_090 Hb_000390_250--Hb_001366_090 Hb_000622_340 Hb_000622_340 Hb_000991_040--Hb_000622_340 Hb_000260_600 Hb_000260_600 Hb_000991_040--Hb_000260_600 Hb_008937_010 Hb_008937_010 Hb_000991_040--Hb_008937_010 Hb_000991_040--Hb_000390_250 Hb_000322_070 Hb_000322_070 Hb_000991_040--Hb_000322_070 Hb_009545_090 Hb_009545_090 Hb_005015_080--Hb_009545_090 Hb_003398_080 Hb_003398_080 Hb_005015_080--Hb_003398_080 Hb_006198_020 Hb_006198_020 Hb_005015_080--Hb_006198_020 Hb_003175_030 Hb_003175_030 Hb_005015_080--Hb_003175_030 Hb_021443_090 Hb_021443_090 Hb_005015_080--Hb_021443_090 Hb_001473_160 Hb_001473_160 Hb_000329_230--Hb_001473_160 Hb_000072_120 Hb_000072_120 Hb_000329_230--Hb_000072_120 Hb_003617_020 Hb_003617_020 Hb_000329_230--Hb_003617_020 Hb_003906_200 Hb_003906_200 Hb_000329_230--Hb_003906_200 Hb_001674_030 Hb_001674_030 Hb_000329_230--Hb_001674_030 Hb_001691_040 Hb_001691_040 Hb_000395_040--Hb_001691_040 Hb_005535_080 Hb_005535_080 Hb_000395_040--Hb_005535_080 Hb_000395_040--Hb_005381_020 Hb_000523_030 Hb_000523_030 Hb_000395_040--Hb_000523_030 Hb_000890_030 Hb_000890_030 Hb_000395_040--Hb_000890_030 Hb_007017_040 Hb_007017_040 Hb_084490_010--Hb_007017_040 Hb_000205_240 Hb_000205_240 Hb_084490_010--Hb_000205_240 Hb_012239_020 Hb_012239_020 Hb_084490_010--Hb_012239_020 Hb_003925_040 Hb_003925_040 Hb_084490_010--Hb_003925_040 Hb_003688_180 Hb_003688_180 Hb_084490_010--Hb_003688_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.77034 12.9017 8.2595 14.7273 3.56495 4.62979
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.26263 4.90674 7.28035 5.07951 4.47827

CAGE analysis