Hb_009545_090

Information

Type -
Description -
Location Contig9545: 58841-59377
Sequence    

Annotation

kegg
ID rcu:RCOM_0911890
description hypothetical protein
nr
ID KDP40188.1
description hypothetical protein JCGZ_02186 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZ08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02186 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63506: 58361-59585
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009545_090 0.0 - - hypothetical protein JCGZ_02186 [Jatropha curcas]
2 Hb_005015_080 0.0750341717 - - PREDICTED: shikimate kinase 1, chloroplastic [Jatropha curcas]
3 Hb_007943_050 0.0885635877 - - peroxiredoxin, putative [Ricinus communis]
4 Hb_002232_480 0.0982794045 - - PREDICTED: telomerase reverse transcriptase [Jatropha curcas]
5 Hb_002869_050 0.0987405516 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
6 Hb_003925_040 0.0991569256 transcription factor TF Family: C2H2 PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Jatropha curcas]
7 Hb_002553_040 0.1002651777 - - PREDICTED: transcription factor bHLH104 [Jatropha curcas]
8 Hb_003682_030 0.1024518764 - - hypothetical protein CICLE_v10020876mg [Citrus clementina]
9 Hb_012239_020 0.103514769 - - PREDICTED: protein VAC14 homolog [Jatropha curcas]
10 Hb_003147_060 0.1047400261 - - syntaxin, plant, putative [Ricinus communis]
11 Hb_000738_020 0.1048626398 - - zinc finger protein, putative [Ricinus communis]
12 Hb_005306_190 0.1053376367 - - Mitochondrial import inner membrane translocase subunit tim23, putative [Ricinus communis]
13 Hb_003175_030 0.106132851 - - PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Populus euphratica]
14 Hb_001258_100 0.1062352827 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X1 [Jatropha curcas]
15 Hb_001205_200 0.1087157711 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000357_110 0.1095529038 - - PREDICTED: uncharacterized protein LOC105643970 isoform X2 [Jatropha curcas]
17 Hb_095296_010 0.109633775 - - PREDICTED: syntaxin-32 [Jatropha curcas]
18 Hb_005306_160 0.110616036 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
19 Hb_003398_080 0.110840858 - - PREDICTED: telomere repeat-binding protein 4 isoform X3 [Jatropha curcas]
20 Hb_006570_150 0.1110466195 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_009545_090 Hb_009545_090 Hb_005015_080 Hb_005015_080 Hb_009545_090--Hb_005015_080 Hb_007943_050 Hb_007943_050 Hb_009545_090--Hb_007943_050 Hb_002232_480 Hb_002232_480 Hb_009545_090--Hb_002232_480 Hb_002869_050 Hb_002869_050 Hb_009545_090--Hb_002869_050 Hb_003925_040 Hb_003925_040 Hb_009545_090--Hb_003925_040 Hb_002553_040 Hb_002553_040 Hb_009545_090--Hb_002553_040 Hb_003398_080 Hb_003398_080 Hb_005015_080--Hb_003398_080 Hb_006198_020 Hb_006198_020 Hb_005015_080--Hb_006198_020 Hb_003175_030 Hb_003175_030 Hb_005015_080--Hb_003175_030 Hb_000815_240 Hb_000815_240 Hb_005015_080--Hb_000815_240 Hb_021443_090 Hb_021443_090 Hb_005015_080--Hb_021443_090 Hb_000045_300 Hb_000045_300 Hb_007943_050--Hb_000045_300 Hb_005306_190 Hb_005306_190 Hb_007943_050--Hb_005306_190 Hb_000210_010 Hb_000210_010 Hb_007943_050--Hb_000210_010 Hb_095296_010 Hb_095296_010 Hb_007943_050--Hb_095296_010 Hb_010519_040 Hb_010519_040 Hb_007943_050--Hb_010519_040 Hb_004994_240 Hb_004994_240 Hb_002232_480--Hb_004994_240 Hb_011360_050 Hb_011360_050 Hb_002232_480--Hb_011360_050 Hb_000802_090 Hb_000802_090 Hb_002232_480--Hb_000802_090 Hb_001300_010 Hb_001300_010 Hb_002232_480--Hb_001300_010 Hb_001366_090 Hb_001366_090 Hb_002232_480--Hb_001366_090 Hb_007017_040 Hb_007017_040 Hb_002232_480--Hb_007017_040 Hb_002869_050--Hb_002232_480 Hb_000170_240 Hb_000170_240 Hb_002869_050--Hb_000170_240 Hb_000445_470 Hb_000445_470 Hb_002869_050--Hb_000445_470 Hb_003147_060 Hb_003147_060 Hb_002869_050--Hb_003147_060 Hb_005381_020 Hb_005381_020 Hb_002869_050--Hb_005381_020 Hb_003925_040--Hb_003147_060 Hb_004774_020 Hb_004774_020 Hb_003925_040--Hb_004774_020 Hb_084490_010 Hb_084490_010 Hb_003925_040--Hb_084490_010 Hb_004108_240 Hb_004108_240 Hb_003925_040--Hb_004108_240 Hb_002042_170 Hb_002042_170 Hb_003925_040--Hb_002042_170 Hb_000010_110 Hb_000010_110 Hb_002553_040--Hb_000010_110 Hb_003020_270 Hb_003020_270 Hb_002553_040--Hb_003020_270 Hb_000886_050 Hb_000886_050 Hb_002553_040--Hb_000886_050 Hb_000522_150 Hb_000522_150 Hb_002553_040--Hb_000522_150 Hb_000487_210 Hb_000487_210 Hb_002553_040--Hb_000487_210 Hb_005116_060 Hb_005116_060 Hb_002553_040--Hb_005116_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.4994 76.7131 51.1737 58.1778 27.3777 27.5009
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.6917 44.7522 24.8679 20.7836 18.3754

CAGE analysis