Hb_021443_090

Information

Type -
Description -
Location Contig21443: 59026-60549
Sequence    

Annotation

kegg
ID rcu:RCOM_1498620
description Xyloglucan galactosyltransferase KATAMARI1, putative
nr
ID XP_012090368.1
description PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
swissprot
ID Q8H038
description Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1
trembl
ID A0A067JEW5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26203 PE=4 SV=1
Gene Ontology
ID GO:0005794
description xyloglucan galactosyltransferase katamari1 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 022_C21.ab1: 58835-59432

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_021443_090 0.0 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
2 Hb_001146_020 0.0960769003 - - hypothetical protein CISIN_1g013079mg [Citrus sinensis]
3 Hb_005015_080 0.0963405044 - - PREDICTED: shikimate kinase 1, chloroplastic [Jatropha curcas]
4 Hb_000815_240 0.1116729397 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
5 Hb_000418_010 0.1140793467 - - PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Jatropha curcas]
6 Hb_000991_040 0.1203081164 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
7 Hb_006198_020 0.1209492743 - - PREDICTED: uncharacterized protein LOC105644416 [Jatropha curcas]
8 Hb_009545_090 0.1241284554 - - hypothetical protein JCGZ_02186 [Jatropha curcas]
9 Hb_002071_050 0.1250751496 - - PREDICTED: mitogen-activated protein kinase kinase 5-like [Jatropha curcas]
10 Hb_004917_040 0.1258608802 - - hypothetical protein POPTR_0009s03470g [Populus trichocarpa]
11 Hb_006711_070 0.1277522159 - - hypothetical protein RCOM_1336320 [Ricinus communis]
12 Hb_002869_050 0.1293706881 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
13 Hb_127311_010 0.1348714215 - - hypothetical protein JCGZ_07497 [Jatropha curcas]
14 Hb_000205_240 0.1348767137 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_000608_280 0.1360037496 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
16 Hb_000170_240 0.136396337 - - PREDICTED: auxilin-related protein 1 [Jatropha curcas]
17 Hb_012799_140 0.1374708507 - - PREDICTED: membrane steroid-binding protein 2-like [Jatropha curcas]
18 Hb_005096_010 0.1388188478 - - PREDICTED: uncharacterized protein LOC105641403 [Jatropha curcas]
19 Hb_000671_080 0.1409888694 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
20 Hb_000802_090 0.1411507818 - - ornithine aminotransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_021443_090 Hb_021443_090 Hb_001146_020 Hb_001146_020 Hb_021443_090--Hb_001146_020 Hb_005015_080 Hb_005015_080 Hb_021443_090--Hb_005015_080 Hb_000815_240 Hb_000815_240 Hb_021443_090--Hb_000815_240 Hb_000418_010 Hb_000418_010 Hb_021443_090--Hb_000418_010 Hb_000991_040 Hb_000991_040 Hb_021443_090--Hb_000991_040 Hb_006198_020 Hb_006198_020 Hb_021443_090--Hb_006198_020 Hb_001146_020--Hb_005015_080 Hb_001146_020--Hb_000815_240 Hb_024879_010 Hb_024879_010 Hb_001146_020--Hb_024879_010 Hb_010661_010 Hb_010661_010 Hb_001146_020--Hb_010661_010 Hb_015807_030 Hb_015807_030 Hb_001146_020--Hb_015807_030 Hb_009545_090 Hb_009545_090 Hb_005015_080--Hb_009545_090 Hb_003398_080 Hb_003398_080 Hb_005015_080--Hb_003398_080 Hb_005015_080--Hb_006198_020 Hb_003175_030 Hb_003175_030 Hb_005015_080--Hb_003175_030 Hb_005015_080--Hb_000815_240 Hb_000390_250 Hb_000390_250 Hb_000815_240--Hb_000390_250 Hb_000815_240--Hb_000991_040 Hb_000329_230 Hb_000329_230 Hb_000815_240--Hb_000329_230 Hb_000395_040 Hb_000395_040 Hb_000815_240--Hb_000395_040 Hb_084490_010 Hb_084490_010 Hb_000815_240--Hb_084490_010 Hb_000197_030 Hb_000197_030 Hb_000418_010--Hb_000197_030 Hb_000069_480 Hb_000069_480 Hb_000418_010--Hb_000069_480 Hb_000671_080 Hb_000671_080 Hb_000418_010--Hb_000671_080 Hb_001257_100 Hb_001257_100 Hb_000418_010--Hb_001257_100 Hb_001489_100 Hb_001489_100 Hb_000418_010--Hb_001489_100 Hb_000418_010--Hb_006198_020 Hb_000622_340 Hb_000622_340 Hb_000991_040--Hb_000622_340 Hb_000260_600 Hb_000260_600 Hb_000991_040--Hb_000260_600 Hb_008937_010 Hb_008937_010 Hb_000991_040--Hb_008937_010 Hb_000991_040--Hb_000390_250 Hb_000322_070 Hb_000322_070 Hb_000991_040--Hb_000322_070 Hb_006198_020--Hb_000197_030 Hb_000059_020 Hb_000059_020 Hb_006198_020--Hb_000059_020 Hb_000069_130 Hb_000069_130 Hb_006198_020--Hb_000069_130 Hb_000940_200 Hb_000940_200 Hb_006198_020--Hb_000940_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.3324 53.8764 22.5215 48.2845 12.9413 11.7125
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.804 14.9572 13.2883 13.5459 11.7167

CAGE analysis