Hb_015807_030

Information

Type -
Description -
Location Contig15807: 36965-37576
Sequence    

Annotation

kegg
ID cit:102630232
description protein NDR1-like
nr
ID XP_012070740.1
description PREDICTED: protein NDR1-like [Jatropha curcas]
swissprot
ID O48915
description Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1
trembl
ID A0A067L4N7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00811 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13876: 37180-37985
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015807_030 0.0 - - PREDICTED: protein NDR1-like [Jatropha curcas]
2 Hb_000035_050 0.1346794249 - - PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas]
3 Hb_004117_170 0.1396662473 - - PREDICTED: probable receptor-like protein kinase At3g55450 [Jatropha curcas]
4 Hb_001376_010 0.1604890539 - - diacylglycerol kinase, alpha, putative [Ricinus communis]
5 Hb_002450_030 0.1614273425 - - ATPP2-A13, putative [Ricinus communis]
6 Hb_000042_330 0.1634105154 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000046_310 0.1649002839 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
8 Hb_001146_020 0.16696383 - - hypothetical protein CISIN_1g013079mg [Citrus sinensis]
9 Hb_084849_010 0.1677502245 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007164_030 0.1677684001 transcription factor TF Family: Orphans two-component system sensor histidine kinase/response regulator, putative [Ricinus communis]
11 Hb_000637_020 0.1679870609 - - PREDICTED: uncharacterized protein LOC105650669 [Jatropha curcas]
12 Hb_013358_020 0.1695514865 - - ccr4-associated factor, putative [Ricinus communis]
13 Hb_171900_020 0.1733403556 - - PREDICTED: uncharacterized protein LOC105643207 [Jatropha curcas]
14 Hb_001381_060 0.1762701114 - - monoxygenase, putative [Ricinus communis]
15 Hb_001863_160 0.1797800987 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
16 Hb_013241_010 0.1813218132 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
17 Hb_002686_150 0.1819085134 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
18 Hb_000815_240 0.1829611037 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
19 Hb_000645_200 0.1836134269 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]
20 Hb_001140_090 0.1836463214 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_015807_030 Hb_015807_030 Hb_000035_050 Hb_000035_050 Hb_015807_030--Hb_000035_050 Hb_004117_170 Hb_004117_170 Hb_015807_030--Hb_004117_170 Hb_001376_010 Hb_001376_010 Hb_015807_030--Hb_001376_010 Hb_002450_030 Hb_002450_030 Hb_015807_030--Hb_002450_030 Hb_000042_330 Hb_000042_330 Hb_015807_030--Hb_000042_330 Hb_000046_310 Hb_000046_310 Hb_015807_030--Hb_000046_310 Hb_000035_050--Hb_004117_170 Hb_013358_020 Hb_013358_020 Hb_000035_050--Hb_013358_020 Hb_005714_100 Hb_005714_100 Hb_000035_050--Hb_005714_100 Hb_018790_050 Hb_018790_050 Hb_000035_050--Hb_018790_050 Hb_056196_060 Hb_056196_060 Hb_000035_050--Hb_056196_060 Hb_000035_050--Hb_001376_010 Hb_004117_170--Hb_013358_020 Hb_004117_170--Hb_018790_050 Hb_007253_010 Hb_007253_010 Hb_004117_170--Hb_007253_010 Hb_000749_070 Hb_000749_070 Hb_004117_170--Hb_000749_070 Hb_004117_170--Hb_001376_010 Hb_000638_280 Hb_000638_280 Hb_001376_010--Hb_000638_280 Hb_004108_240 Hb_004108_240 Hb_001376_010--Hb_004108_240 Hb_002965_050 Hb_002965_050 Hb_001376_010--Hb_002965_050 Hb_000156_090 Hb_000156_090 Hb_001376_010--Hb_000156_090 Hb_003849_190 Hb_003849_190 Hb_002450_030--Hb_003849_190 Hb_002217_500 Hb_002217_500 Hb_002450_030--Hb_002217_500 Hb_023344_110 Hb_023344_110 Hb_002450_030--Hb_023344_110 Hb_084849_010 Hb_084849_010 Hb_002450_030--Hb_084849_010 Hb_000645_200 Hb_000645_200 Hb_002450_030--Hb_000645_200 Hb_004218_120 Hb_004218_120 Hb_002450_030--Hb_004218_120 Hb_010661_010 Hb_010661_010 Hb_000042_330--Hb_010661_010 Hb_127311_010 Hb_127311_010 Hb_000042_330--Hb_127311_010 Hb_001500_030 Hb_001500_030 Hb_000042_330--Hb_001500_030 Hb_013241_010 Hb_013241_010 Hb_000042_330--Hb_013241_010 Hb_000656_390 Hb_000656_390 Hb_000042_330--Hb_000656_390 Hb_000042_330--Hb_023344_110 Hb_000818_120 Hb_000818_120 Hb_000046_310--Hb_000818_120 Hb_001863_160 Hb_001863_160 Hb_000046_310--Hb_001863_160 Hb_000046_310--Hb_018790_050 Hb_001155_050 Hb_001155_050 Hb_000046_310--Hb_001155_050 Hb_080362_010 Hb_080362_010 Hb_000046_310--Hb_080362_010 Hb_007741_130 Hb_007741_130 Hb_000046_310--Hb_007741_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.41748 18.2656 18.2032 23.9842 0.782559 1.9078
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.7077 6.24249 8.38104 5.96647 3.59066

CAGE analysis