Hb_000069_130

Information

Type -
Description -
Location Contig69: 119362-123338
Sequence    

Annotation

kegg
ID rcu:RCOM_0716930
description hypothetical protein
nr
ID XP_012083184.1
description PREDICTED: uncharacterized protein LOC105642829 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K859
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14241 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54177: 119578-123183 , PASA_asmbl_54178: 119669-123338 , PASA_asmbl_54179: 119937-120358
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_130 0.0 - - PREDICTED: uncharacterized protein LOC105642829 isoform X1 [Jatropha curcas]
2 Hb_003912_040 0.0589202218 - - hypothetical protein CISIN_1g005153mg [Citrus sinensis]
3 Hb_000402_230 0.0602169074 - - PREDICTED: sorting nexin 2A-like isoform X1 [Jatropha curcas]
4 Hb_000809_160 0.0656916473 - - hypothetical protein JCGZ_12355 [Jatropha curcas]
5 Hb_001089_050 0.065831039 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 4 [Jatropha curcas]
6 Hb_002374_290 0.0674670049 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Jatropha curcas]
7 Hb_002542_130 0.0678738779 transcription factor TF Family: HB Homeobox protein LUMINIDEPENDENS, putative [Ricinus communis]
8 Hb_000120_910 0.0681134594 - - plant ubiquilin, putative [Ricinus communis]
9 Hb_002477_250 0.0682293389 - - DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus communis]
10 Hb_001545_150 0.0682302394 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105635527 [Jatropha curcas]
11 Hb_003398_080 0.0687328614 - - PREDICTED: telomere repeat-binding protein 4 isoform X3 [Jatropha curcas]
12 Hb_002325_040 0.06982963 - - PREDICTED: uncharacterized protein LOC105645422 isoform X1 [Jatropha curcas]
13 Hb_008253_020 0.0702107613 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
14 Hb_001205_200 0.0702401942 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002284_170 0.071170164 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
16 Hb_003866_080 0.0711778987 - - PREDICTED: uncharacterized protein LOC105639150 [Jatropha curcas]
17 Hb_000094_090 0.0719329311 - - PREDICTED: DUF21 domain-containing protein At1g47330 isoform X1 [Jatropha curcas]
18 Hb_031641_010 0.072084418 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004410_070 0.0722230982 - - PREDICTED: protein LTV1 homolog [Jatropha curcas]
20 Hb_000862_040 0.0728507166 - - ara4-interacting protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000069_130 Hb_000069_130 Hb_003912_040 Hb_003912_040 Hb_000069_130--Hb_003912_040 Hb_000402_230 Hb_000402_230 Hb_000069_130--Hb_000402_230 Hb_000809_160 Hb_000809_160 Hb_000069_130--Hb_000809_160 Hb_001089_050 Hb_001089_050 Hb_000069_130--Hb_001089_050 Hb_002374_290 Hb_002374_290 Hb_000069_130--Hb_002374_290 Hb_002542_130 Hb_002542_130 Hb_000069_130--Hb_002542_130 Hb_000046_570 Hb_000046_570 Hb_003912_040--Hb_000046_570 Hb_002492_010 Hb_002492_010 Hb_003912_040--Hb_002492_010 Hb_007062_040 Hb_007062_040 Hb_003912_040--Hb_007062_040 Hb_008226_090 Hb_008226_090 Hb_003912_040--Hb_008226_090 Hb_000120_910 Hb_000120_910 Hb_003912_040--Hb_000120_910 Hb_004143_100 Hb_004143_100 Hb_000402_230--Hb_004143_100 Hb_000402_230--Hb_001089_050 Hb_000009_500 Hb_000009_500 Hb_000402_230--Hb_000009_500 Hb_008253_020 Hb_008253_020 Hb_000402_230--Hb_008253_020 Hb_003866_080 Hb_003866_080 Hb_000402_230--Hb_003866_080 Hb_011849_040 Hb_011849_040 Hb_000402_230--Hb_011849_040 Hb_000094_090 Hb_000094_090 Hb_000809_160--Hb_000094_090 Hb_002477_250 Hb_002477_250 Hb_000809_160--Hb_002477_250 Hb_031641_010 Hb_031641_010 Hb_000809_160--Hb_031641_010 Hb_000866_450 Hb_000866_450 Hb_000809_160--Hb_000866_450 Hb_000809_160--Hb_000120_910 Hb_000363_120 Hb_000363_120 Hb_000809_160--Hb_000363_120 Hb_001089_050--Hb_003866_080 Hb_000861_080 Hb_000861_080 Hb_001089_050--Hb_000861_080 Hb_001545_150 Hb_001545_150 Hb_001089_050--Hb_001545_150 Hb_001089_050--Hb_004143_100 Hb_001716_020 Hb_001716_020 Hb_001089_050--Hb_001716_020 Hb_001541_250 Hb_001541_250 Hb_002374_290--Hb_001541_250 Hb_002374_290--Hb_002542_130 Hb_007426_060 Hb_007426_060 Hb_002374_290--Hb_007426_060 Hb_029977_040 Hb_029977_040 Hb_002374_290--Hb_029977_040 Hb_001534_210 Hb_001534_210 Hb_002374_290--Hb_001534_210 Hb_001231_090 Hb_001231_090 Hb_002542_130--Hb_001231_090 Hb_002542_130--Hb_001545_150 Hb_001277_300 Hb_001277_300 Hb_002542_130--Hb_001277_300 Hb_005188_040 Hb_005188_040 Hb_002542_130--Hb_005188_040 Hb_004410_070 Hb_004410_070 Hb_002542_130--Hb_004410_070 Hb_002282_060 Hb_002282_060 Hb_002542_130--Hb_002282_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.4446 42.8445 24.1336 24.6451 20.259 21.6651
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.2806 13.4697 11.5852 18.6491 15.8999

CAGE analysis