Hb_005188_040

Information

Type -
Description -
Location Contig5188: 21359-43804
Sequence    

Annotation

kegg
ID sly:101247677
description protein furry homolog-like
nr
ID XP_009759064.1
description PREDICTED: protein furry homolog-like [Nicotiana sylvestris]
swissprot
ID Q9VT28
description Protein furry OS=Drosophila melanogaster GN=fry PE=1 SV=2
trembl
ID K4BC88
description Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g089370.2 PE=4 SV=1
Gene Ontology
ID GO:0005886
description protein furry homolog-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46624: 26999-27151 , PASA_asmbl_46625: 36911-37272 , PASA_asmbl_46626: 43668-44011
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005188_040 0.0 - - PREDICTED: protein furry homolog-like [Nicotiana sylvestris]
2 Hb_002542_130 0.0658895322 transcription factor TF Family: HB Homeobox protein LUMINIDEPENDENS, putative [Ricinus communis]
3 Hb_004785_030 0.0676356275 transcription factor TF Family: bZIP PREDICTED: transcription factor VIP1 [Jatropha curcas]
4 Hb_001545_150 0.0678307352 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105635527 [Jatropha curcas]
5 Hb_011242_060 0.0695969936 transcription factor TF Family: SNF2 Chromo domain protein, putative [Ricinus communis]
6 Hb_000265_090 0.0696334215 - - PREDICTED: flowering time control protein FPA [Jatropha curcas]
7 Hb_009028_010 0.0708084073 - - PREDICTED: probable disease resistance protein At1g12280 [Jatropha curcas]
8 Hb_044653_020 0.0744109875 transcription factor, desease resistance TF Family: GNAT, Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
9 Hb_009302_030 0.0783365937 - - hypothetical protein RCOM_1176340 [Ricinus communis]
10 Hb_014834_060 0.0784331359 - - PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
11 Hb_006117_080 0.0788163326 - - PREDICTED: transcription factor GTE4 isoform X1 [Jatropha curcas]
12 Hb_000703_130 0.078897701 - - PREDICTED: ATP-dependent RNA helicase DHX36 [Jatropha curcas]
13 Hb_000720_150 0.0795891253 - - PREDICTED: uncharacterized protein LOC105645849 isoform X3 [Jatropha curcas]
14 Hb_003918_030 0.080385022 - - PREDICTED: oxysterol-binding protein-related protein 1C-like isoform X1 [Jatropha curcas]
15 Hb_000069_470 0.0815050833 - - PREDICTED: uncharacterized protein LOC105642863 isoform X1 [Jatropha curcas]
16 Hb_003604_050 0.0831380987 - - PREDICTED: MAP3K epsilon protein kinase 1-like isoform X2 [Jatropha curcas]
17 Hb_002374_290 0.0833499118 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Jatropha curcas]
18 Hb_004899_040 0.0859253704 transcription factor TF Family: ARF Auxin response factor [Medicago truncatula]
19 Hb_003939_060 0.0859394046 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000479_070 0.0860320657 - - PREDICTED: uncharacterized protein LOC105644141 [Jatropha curcas]

Gene co-expression network

sample Hb_005188_040 Hb_005188_040 Hb_002542_130 Hb_002542_130 Hb_005188_040--Hb_002542_130 Hb_004785_030 Hb_004785_030 Hb_005188_040--Hb_004785_030 Hb_001545_150 Hb_001545_150 Hb_005188_040--Hb_001545_150 Hb_011242_060 Hb_011242_060 Hb_005188_040--Hb_011242_060 Hb_000265_090 Hb_000265_090 Hb_005188_040--Hb_000265_090 Hb_009028_010 Hb_009028_010 Hb_005188_040--Hb_009028_010 Hb_001231_090 Hb_001231_090 Hb_002542_130--Hb_001231_090 Hb_002542_130--Hb_001545_150 Hb_001277_300 Hb_001277_300 Hb_002542_130--Hb_001277_300 Hb_004410_070 Hb_004410_070 Hb_002542_130--Hb_004410_070 Hb_002282_060 Hb_002282_060 Hb_002542_130--Hb_002282_060 Hb_002119_090 Hb_002119_090 Hb_004785_030--Hb_002119_090 Hb_000700_060 Hb_000700_060 Hb_004785_030--Hb_000700_060 Hb_044653_020 Hb_044653_020 Hb_004785_030--Hb_044653_020 Hb_003604_050 Hb_003604_050 Hb_004785_030--Hb_003604_050 Hb_020805_150 Hb_020805_150 Hb_004785_030--Hb_020805_150 Hb_000479_070 Hb_000479_070 Hb_001545_150--Hb_000479_070 Hb_001089_050 Hb_001089_050 Hb_001545_150--Hb_001089_050 Hb_031042_050 Hb_031042_050 Hb_001545_150--Hb_031042_050 Hb_000402_230 Hb_000402_230 Hb_001545_150--Hb_000402_230 Hb_003918_030 Hb_003918_030 Hb_001545_150--Hb_003918_030 Hb_001279_120 Hb_001279_120 Hb_001545_150--Hb_001279_120 Hb_000069_470 Hb_000069_470 Hb_011242_060--Hb_000069_470 Hb_003581_170 Hb_003581_170 Hb_011242_060--Hb_003581_170 Hb_011242_060--Hb_000265_090 Hb_003729_030 Hb_003729_030 Hb_011242_060--Hb_003729_030 Hb_000836_020 Hb_000836_020 Hb_011242_060--Hb_000836_020 Hb_000321_150 Hb_000321_150 Hb_011242_060--Hb_000321_150 Hb_000703_130 Hb_000703_130 Hb_000265_090--Hb_000703_130 Hb_000665_230 Hb_000665_230 Hb_000265_090--Hb_000665_230 Hb_010712_040 Hb_010712_040 Hb_000265_090--Hb_010712_040 Hb_000265_090--Hb_000836_020 Hb_144744_010 Hb_144744_010 Hb_009028_010--Hb_144744_010 Hb_001541_250 Hb_001541_250 Hb_009028_010--Hb_001541_250 Hb_001935_140 Hb_001935_140 Hb_009028_010--Hb_001935_140 Hb_009028_010--Hb_004785_030 Hb_007054_040 Hb_007054_040 Hb_009028_010--Hb_007054_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.93677 6.11155 1.98366 2.44751 2.23957 2.21684
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.12918 1.54754 1.36012 1.91255 2.8605

CAGE analysis