Hb_050959_010

Information

Type -
Description -
Location Contig50959: 57-3251
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_050959_010 0.0 - - -
2 Hb_006384_010 0.1543137007 - - WD-repeat protein, putative [Ricinus communis]
3 Hb_001140_070 0.1796463105 - - Chromosome transmission fidelity protein 8, putative isoform 2 [Theobroma cacao]
4 Hb_001825_040 0.1831005591 - - myosin XI, putative [Ricinus communis]
5 Hb_116420_010 0.1840878984 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
6 Hb_002259_060 0.1879303014 - - PREDICTED: kinesin-like calmodulin-binding protein isoform X4 [Jatropha curcas]
7 Hb_000889_010 0.1897933114 transcription factor TF Family: MYB-related hypothetical protein PRUPE_ppa014728mg [Prunus persica]
8 Hb_004449_180 0.195676763 - - PREDICTED: SAC3 family protein 1 [Jatropha curcas]
9 Hb_000656_190 0.1967979404 - - PREDICTED: probable nucleoside diphosphate kinase 5 [Jatropha curcas]
10 Hb_006816_270 0.1972364094 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000555_100 0.1979023011 - - hypothetical protein JCGZ_14689 [Jatropha curcas]
12 Hb_039021_010 0.2017503794 transcription factor TF Family: B3 hypothetical protein RCOM_0465210 [Ricinus communis]
13 Hb_008053_060 0.202976418 - - PREDICTED: protein PAIR1 isoform X2 [Jatropha curcas]
14 Hb_003673_040 0.206949018 - - dynamin family protein [Populus trichocarpa]
15 Hb_001148_090 0.2077761335 - - hypothetical protein JCGZ_14711 [Jatropha curcas]
16 Hb_000580_100 0.2078349475 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]
17 Hb_004357_050 0.2106679429 - - PREDICTED: histone deacetylase HDT1-like [Jatropha curcas]
18 Hb_001476_060 0.2111016286 - - PREDICTED: uncharacterized protein At5g01610 [Jatropha curcas]
19 Hb_168893_020 0.2113415912 - - PREDICTED: probable protein S-acyltransferase 15 [Jatropha curcas]
20 Hb_003050_260 0.2115377177 - - DNA replication licensing factor MCM3, putative [Ricinus communis]

Gene co-expression network

sample Hb_050959_010 Hb_050959_010 Hb_006384_010 Hb_006384_010 Hb_050959_010--Hb_006384_010 Hb_001140_070 Hb_001140_070 Hb_050959_010--Hb_001140_070 Hb_001825_040 Hb_001825_040 Hb_050959_010--Hb_001825_040 Hb_116420_010 Hb_116420_010 Hb_050959_010--Hb_116420_010 Hb_002259_060 Hb_002259_060 Hb_050959_010--Hb_002259_060 Hb_000889_010 Hb_000889_010 Hb_050959_010--Hb_000889_010 Hb_006384_010--Hb_116420_010 Hb_004357_050 Hb_004357_050 Hb_006384_010--Hb_004357_050 Hb_004449_180 Hb_004449_180 Hb_006384_010--Hb_004449_180 Hb_000398_060 Hb_000398_060 Hb_006384_010--Hb_000398_060 Hb_002272_270 Hb_002272_270 Hb_006384_010--Hb_002272_270 Hb_005288_130 Hb_005288_130 Hb_006384_010--Hb_005288_130 Hb_182424_030 Hb_182424_030 Hb_001140_070--Hb_182424_030 Hb_001396_210 Hb_001396_210 Hb_001140_070--Hb_001396_210 Hb_002027_390 Hb_002027_390 Hb_001140_070--Hb_002027_390 Hb_009615_020 Hb_009615_020 Hb_001140_070--Hb_009615_020 Hb_039021_010 Hb_039021_010 Hb_001140_070--Hb_039021_010 Hb_000345_510 Hb_000345_510 Hb_001140_070--Hb_000345_510 Hb_004079_130 Hb_004079_130 Hb_001825_040--Hb_004079_130 Hb_002740_090 Hb_002740_090 Hb_001825_040--Hb_002740_090 Hb_000656_300 Hb_000656_300 Hb_001825_040--Hb_000656_300 Hb_004480_020 Hb_004480_020 Hb_001825_040--Hb_004480_020 Hb_001482_050 Hb_001482_050 Hb_001825_040--Hb_001482_050 Hb_124373_010 Hb_124373_010 Hb_001825_040--Hb_124373_010 Hb_001159_150 Hb_001159_150 Hb_116420_010--Hb_001159_150 Hb_006816_270 Hb_006816_270 Hb_116420_010--Hb_006816_270 Hb_009680_020 Hb_009680_020 Hb_116420_010--Hb_009680_020 Hb_007943_200 Hb_007943_200 Hb_116420_010--Hb_007943_200 Hb_000676_140 Hb_000676_140 Hb_116420_010--Hb_000676_140 Hb_002874_130 Hb_002874_130 Hb_002259_060--Hb_002874_130 Hb_022250_150 Hb_022250_150 Hb_002259_060--Hb_022250_150 Hb_008053_060 Hb_008053_060 Hb_002259_060--Hb_008053_060 Hb_004785_040 Hb_004785_040 Hb_002259_060--Hb_004785_040 Hb_005970_010 Hb_005970_010 Hb_002259_060--Hb_005970_010 Hb_089140_040 Hb_089140_040 Hb_002259_060--Hb_089140_040 Hb_009898_040 Hb_009898_040 Hb_000889_010--Hb_009898_040 Hb_000889_010--Hb_004449_180 Hb_000684_520 Hb_000684_520 Hb_000889_010--Hb_000684_520 Hb_001799_060 Hb_001799_060 Hb_000889_010--Hb_001799_060 Hb_168893_020 Hb_168893_020 Hb_000889_010--Hb_168893_020 Hb_001148_090 Hb_001148_090 Hb_000889_010--Hb_001148_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.198999 0.153714 0.482349 0.660153 0.169595 0.0876551
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.398955 0.403389 0 0.704671 0.182077

CAGE analysis