Hb_000656_300

Information

Type -
Description -
Location Contig656: 255133-262459
Sequence    

Annotation

kegg
ID pop:POPTR_0003s06570g
description POPTRDRAFT_853157; aldehyde dehydrogenase family 7 member a1 turgor responsive family protein
nr
ID XP_011036450.1
description PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Populus euphratica]
swissprot
ID Q9SYG7
description Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3
trembl
ID B9GVZ7
description Aldehyde dehydrogenase family 7 member a1 turgor responsive family protein OS=Populus trichocarpa GN=POPTR_0003s06570g PE=3 SV=2
Gene Ontology
ID GO:0005829
description aldehyde dehydrogenase family 7 member b4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52739: 255138-261799 , PASA_asmbl_52740: 255138-261799
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000656_300 0.0 - - PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Populus euphratica]
2 Hb_003540_050 0.0933217499 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
3 Hb_002740_090 0.0956866419 - - PREDICTED: putative membrane-bound O-acyltransferase C24H6.01c [Jatropha curcas]
4 Hb_001268_340 0.0957587516 - - Actin, putative [Ricinus communis]
5 Hb_004079_130 0.1081956756 - - PREDICTED: uncharacterized protein LOC105637708 [Jatropha curcas]
6 Hb_001825_040 0.1135786691 - - myosin XI, putative [Ricinus communis]
7 Hb_002311_380 0.1157831204 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
8 Hb_000186_300 0.1166254941 - - PREDICTED: malonyl-CoA decarboxylase, mitochondrial [Jatropha curcas]
9 Hb_000330_060 0.1203819959 - - PREDICTED: adenosine kinase [Jatropha curcas]
10 Hb_115137_010 0.1205634624 - - PREDICTED: probable protein S-acyltransferase 23 isoform X2 [Jatropha curcas]
11 Hb_005064_010 0.1210052759 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
12 Hb_001053_190 0.122549401 - - ADP,ATP carrier protein, putative [Ricinus communis]
13 Hb_014361_060 0.1252173334 - - PREDICTED: probable prolyl 4-hydroxylase 9 [Jatropha curcas]
14 Hb_000622_110 0.1254002872 - - cmp-sialic acid transporter, putative [Ricinus communis]
15 Hb_007919_110 0.125542142 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
16 Hb_000227_390 0.1267329133 - - PREDICTED: vacuole membrane protein KMS1 isoform X2 [Jatropha curcas]
17 Hb_001892_030 0.1267557262 - - PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Jatropha curcas]
18 Hb_001250_050 0.1270400606 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
19 Hb_003209_130 0.1283246373 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
20 Hb_000215_300 0.1283280024 - - mitochondrial processing peptidase alpha subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_000656_300 Hb_000656_300 Hb_003540_050 Hb_003540_050 Hb_000656_300--Hb_003540_050 Hb_002740_090 Hb_002740_090 Hb_000656_300--Hb_002740_090 Hb_001268_340 Hb_001268_340 Hb_000656_300--Hb_001268_340 Hb_004079_130 Hb_004079_130 Hb_000656_300--Hb_004079_130 Hb_001825_040 Hb_001825_040 Hb_000656_300--Hb_001825_040 Hb_002311_380 Hb_002311_380 Hb_000656_300--Hb_002311_380 Hb_000072_300 Hb_000072_300 Hb_003540_050--Hb_000072_300 Hb_002686_080 Hb_002686_080 Hb_003540_050--Hb_002686_080 Hb_005064_010 Hb_005064_010 Hb_003540_050--Hb_005064_010 Hb_001053_190 Hb_001053_190 Hb_003540_050--Hb_001053_190 Hb_001279_190 Hb_001279_190 Hb_003540_050--Hb_001279_190 Hb_002740_080 Hb_002740_080 Hb_003540_050--Hb_002740_080 Hb_007137_050 Hb_007137_050 Hb_002740_090--Hb_007137_050 Hb_086063_020 Hb_086063_020 Hb_002740_090--Hb_086063_020 Hb_188063_050 Hb_188063_050 Hb_002740_090--Hb_188063_050 Hb_000703_330 Hb_000703_330 Hb_002740_090--Hb_000703_330 Hb_001250_050 Hb_001250_050 Hb_002740_090--Hb_001250_050 Hb_001227_120 Hb_001227_120 Hb_002740_090--Hb_001227_120 Hb_001268_340--Hb_003540_050 Hb_001195_640 Hb_001195_640 Hb_001268_340--Hb_001195_640 Hb_004032_160 Hb_004032_160 Hb_001268_340--Hb_004032_160 Hb_001268_340--Hb_000072_300 Hb_004117_190 Hb_004117_190 Hb_001268_340--Hb_004117_190 Hb_000120_810 Hb_000120_810 Hb_004079_130--Hb_000120_810 Hb_000227_390 Hb_000227_390 Hb_004079_130--Hb_000227_390 Hb_026198_010 Hb_026198_010 Hb_004079_130--Hb_026198_010 Hb_001482_050 Hb_001482_050 Hb_004079_130--Hb_001482_050 Hb_000704_030 Hb_000704_030 Hb_004079_130--Hb_000704_030 Hb_012092_050 Hb_012092_050 Hb_004079_130--Hb_012092_050 Hb_001825_040--Hb_004079_130 Hb_001825_040--Hb_002740_090 Hb_004480_020 Hb_004480_020 Hb_001825_040--Hb_004480_020 Hb_001825_040--Hb_001482_050 Hb_124373_010 Hb_124373_010 Hb_001825_040--Hb_124373_010 Hb_000958_080 Hb_000958_080 Hb_002311_380--Hb_000958_080 Hb_000046_570 Hb_000046_570 Hb_002311_380--Hb_000046_570 Hb_005381_020 Hb_005381_020 Hb_002311_380--Hb_005381_020 Hb_001366_090 Hb_001366_090 Hb_002311_380--Hb_001366_090 Hb_003929_170 Hb_003929_170 Hb_002311_380--Hb_003929_170 Hb_000635_040 Hb_000635_040 Hb_002311_380--Hb_000635_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.3313 25.0665 44.9419 57.1738 16.3856 13.5276
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.449 11.4314 6.4475 25.2166 25.2052

CAGE analysis