Hb_004117_190

Information

Type -
Description -
Location Contig4117: 126791-127667
Sequence    

Annotation

kegg
ID vvi:104880011
description uncharacterized LOC104880011
nr
ID XP_012091055.1
description PREDICTED: uncharacterized protein LOC105649109 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JDG6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00659 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004117_190 0.0 - - PREDICTED: uncharacterized protein LOC105649109 [Jatropha curcas]
2 Hb_000580_100 0.1101791875 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]
3 Hb_007741_130 0.1108019892 - - hypothetical protein B456_007G089000 [Gossypium raimondii]
4 Hb_005054_220 0.118244106 - - PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier isoform X1 [Jatropha curcas]
5 Hb_101146_010 0.1191553455 - - PREDICTED: peregrin-like [Jatropha curcas]
6 Hb_003540_050 0.1223512428 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
7 Hb_001268_340 0.1247383813 - - Actin, putative [Ricinus communis]
8 Hb_001396_210 0.1272530366 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000120_810 0.1277376904 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
10 Hb_001191_080 0.1286912435 - - protein with unknown function [Ricinus communis]
11 Hb_000186_300 0.1305262985 - - PREDICTED: malonyl-CoA decarboxylase, mitochondrial [Jatropha curcas]
12 Hb_007850_030 0.1306698744 - - PREDICTED: uncharacterized protein LOC105640669 [Jatropha curcas]
13 Hb_004079_130 0.1335658505 - - PREDICTED: uncharacterized protein LOC105637708 [Jatropha curcas]
14 Hb_002092_120 0.1342999919 - - PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Jatropha curcas]
15 Hb_014497_100 0.1351645073 - - PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
16 Hb_004712_190 0.1371825174 - - PREDICTED: uncharacterized protein LOC105633105 [Jatropha curcas]
17 Hb_001633_090 0.1376610017 - - PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Jatropha curcas]
18 Hb_004994_210 0.1397255492 - - phosphomannomutase family protein [Populus trichocarpa]
19 Hb_001863_160 0.1402920516 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
20 Hb_053709_050 0.1416427163 - - PREDICTED: nudix hydrolase 23, chloroplastic isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_004117_190 Hb_004117_190 Hb_000580_100 Hb_000580_100 Hb_004117_190--Hb_000580_100 Hb_007741_130 Hb_007741_130 Hb_004117_190--Hb_007741_130 Hb_005054_220 Hb_005054_220 Hb_004117_190--Hb_005054_220 Hb_101146_010 Hb_101146_010 Hb_004117_190--Hb_101146_010 Hb_003540_050 Hb_003540_050 Hb_004117_190--Hb_003540_050 Hb_001268_340 Hb_001268_340 Hb_004117_190--Hb_001268_340 Hb_039021_010 Hb_039021_010 Hb_000580_100--Hb_039021_010 Hb_005245_120 Hb_005245_120 Hb_000580_100--Hb_005245_120 Hb_000622_200 Hb_000622_200 Hb_000580_100--Hb_000622_200 Hb_000913_040 Hb_000913_040 Hb_000580_100--Hb_000913_040 Hb_004079_130 Hb_004079_130 Hb_000580_100--Hb_004079_130 Hb_001191_080 Hb_001191_080 Hb_007741_130--Hb_001191_080 Hb_001633_090 Hb_001633_090 Hb_007741_130--Hb_001633_090 Hb_007850_030 Hb_007850_030 Hb_007741_130--Hb_007850_030 Hb_007741_130--Hb_005245_120 Hb_001863_160 Hb_001863_160 Hb_007741_130--Hb_001863_160 Hb_053709_050 Hb_053709_050 Hb_007741_130--Hb_053709_050 Hb_007390_020 Hb_007390_020 Hb_005054_220--Hb_007390_020 Hb_005754_040 Hb_005754_040 Hb_005054_220--Hb_005754_040 Hb_005054_220--Hb_003540_050 Hb_004055_050 Hb_004055_050 Hb_005054_220--Hb_004055_050 Hb_000539_050 Hb_000539_050 Hb_005054_220--Hb_000539_050 Hb_002960_090 Hb_002960_090 Hb_101146_010--Hb_002960_090 Hb_000757_130 Hb_000757_130 Hb_101146_010--Hb_000757_130 Hb_101146_010--Hb_007741_130 Hb_001114_170 Hb_001114_170 Hb_101146_010--Hb_001114_170 Hb_000046_310 Hb_000046_310 Hb_101146_010--Hb_000046_310 Hb_000072_300 Hb_000072_300 Hb_003540_050--Hb_000072_300 Hb_002686_080 Hb_002686_080 Hb_003540_050--Hb_002686_080 Hb_005064_010 Hb_005064_010 Hb_003540_050--Hb_005064_010 Hb_001053_190 Hb_001053_190 Hb_003540_050--Hb_001053_190 Hb_001279_190 Hb_001279_190 Hb_003540_050--Hb_001279_190 Hb_002740_080 Hb_002740_080 Hb_003540_050--Hb_002740_080 Hb_000656_300 Hb_000656_300 Hb_001268_340--Hb_000656_300 Hb_001268_340--Hb_003540_050 Hb_001195_640 Hb_001195_640 Hb_001268_340--Hb_001195_640 Hb_004032_160 Hb_004032_160 Hb_001268_340--Hb_004032_160 Hb_001268_340--Hb_000072_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.08221 8.42831 25.3425 21.4901 2.93211 4.90593
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.5643 10.9337 2.48373 8.52049 8.26453

CAGE analysis