Hb_022250_150

Information

Type -
Description -
Location Contig22250: 99155-103894
Sequence    

Annotation

kegg
ID rcu:RCOM_1503000
description hypothetical protein
nr
ID XP_012090543.1
description PREDICTED: uncharacterized protein LOC105648687 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9RA35
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1503000 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022250_150 0.0 - - PREDICTED: uncharacterized protein LOC105648687 [Jatropha curcas]
2 Hb_089140_040 0.1090779041 - - PREDICTED: uncharacterized protein LOC105637966 [Jatropha curcas]
3 Hb_000580_050 0.1100059347 - - -
4 Hb_005970_010 0.1141691124 - - PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 isoform X2 [Jatropha curcas]
5 Hb_062416_010 0.1180086036 - - PREDICTED: UPF0202 protein At1g10490 [Jatropha curcas]
6 Hb_003506_020 0.1196230611 - - PREDICTED: uncharacterized protein LOC105125881 isoform X1 [Populus euphratica]
7 Hb_012180_010 0.1204694814 - - PREDICTED: (S)-ureidoglycine aminohydrolase [Jatropha curcas]
8 Hb_000260_660 0.1272257301 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000856_300 0.1289982539 - - PREDICTED: uncharacterized protein LOC105640498 [Jatropha curcas]
10 Hb_002874_130 0.1292631625 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 9 [Jatropha curcas]
11 Hb_015026_130 0.1299741554 - - quinone oxidoreductase, putative [Ricinus communis]
12 Hb_001259_120 0.130859051 - - hypothetical protein EUGRSUZ_C043222, partial [Eucalyptus grandis]
13 Hb_001085_080 0.1334739041 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
14 Hb_000371_060 0.1357196203 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
15 Hb_003849_220 0.1358689261 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
16 Hb_000243_300 0.1367726108 - - catalytic, putative [Ricinus communis]
17 Hb_000671_080 0.1375990289 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
18 Hb_001675_010 0.1378350169 - - hypothetical protein TRIUR3_09961 [Triticum urartu]
19 Hb_001268_310 0.1381329725 - - -
20 Hb_002272_170 0.138762916 - - PREDICTED: branched-chain-amino-acid aminotransferase-like protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_022250_150 Hb_022250_150 Hb_089140_040 Hb_089140_040 Hb_022250_150--Hb_089140_040 Hb_000580_050 Hb_000580_050 Hb_022250_150--Hb_000580_050 Hb_005970_010 Hb_005970_010 Hb_022250_150--Hb_005970_010 Hb_062416_010 Hb_062416_010 Hb_022250_150--Hb_062416_010 Hb_003506_020 Hb_003506_020 Hb_022250_150--Hb_003506_020 Hb_012180_010 Hb_012180_010 Hb_022250_150--Hb_012180_010 Hb_006468_010 Hb_006468_010 Hb_089140_040--Hb_006468_010 Hb_012092_050 Hb_012092_050 Hb_089140_040--Hb_012092_050 Hb_005489_140 Hb_005489_140 Hb_089140_040--Hb_005489_140 Hb_005215_020 Hb_005215_020 Hb_089140_040--Hb_005215_020 Hb_000008_420 Hb_000008_420 Hb_089140_040--Hb_000008_420 Hb_015026_130 Hb_015026_130 Hb_089140_040--Hb_015026_130 Hb_000856_300 Hb_000856_300 Hb_000580_050--Hb_000856_300 Hb_000260_780 Hb_000260_780 Hb_000580_050--Hb_000260_780 Hb_001558_040 Hb_001558_040 Hb_000580_050--Hb_001558_040 Hb_000243_300 Hb_000243_300 Hb_000580_050--Hb_000243_300 Hb_000172_340 Hb_000172_340 Hb_000580_050--Hb_000172_340 Hb_001085_110 Hb_001085_110 Hb_000580_050--Hb_001085_110 Hb_001085_080 Hb_001085_080 Hb_005970_010--Hb_001085_080 Hb_000000_120 Hb_000000_120 Hb_005970_010--Hb_000000_120 Hb_005970_010--Hb_012180_010 Hb_001097_040 Hb_001097_040 Hb_005970_010--Hb_001097_040 Hb_005970_010--Hb_003506_020 Hb_028077_020 Hb_028077_020 Hb_005970_010--Hb_028077_020 Hb_000631_120 Hb_000631_120 Hb_062416_010--Hb_000631_120 Hb_000059_020 Hb_000059_020 Hb_062416_010--Hb_000059_020 Hb_002524_020 Hb_002524_020 Hb_062416_010--Hb_002524_020 Hb_008948_140 Hb_008948_140 Hb_062416_010--Hb_008948_140 Hb_007765_030 Hb_007765_030 Hb_062416_010--Hb_007765_030 Hb_001259_120 Hb_001259_120 Hb_062416_010--Hb_001259_120 Hb_003506_020--Hb_000000_120 Hb_000216_020 Hb_000216_020 Hb_003506_020--Hb_000216_020 Hb_002122_080 Hb_002122_080 Hb_003506_020--Hb_002122_080 Hb_002151_100 Hb_002151_100 Hb_003506_020--Hb_002151_100 Hb_003506_020--Hb_028077_020 Hb_188063_050 Hb_188063_050 Hb_012180_010--Hb_188063_050 Hb_000098_050 Hb_000098_050 Hb_012180_010--Hb_000098_050 Hb_012180_010--Hb_001085_080 Hb_007137_050 Hb_007137_050 Hb_012180_010--Hb_007137_050 Hb_000622_110 Hb_000622_110 Hb_012180_010--Hb_000622_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.654811 1.81537 0.827322 1.9696 0.835804 0.551329
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.356067 0.638177 0.177633 1.70734 0.561057

CAGE analysis