Hb_000216_020

Information

Type -
Description -
Location Contig216: 52844-60745
Sequence    

Annotation

kegg
ID mdm:103438505
description indole-3-acetaldehyde oxidase-like
nr
ID XP_012066394.1
description PREDICTED: benzaldehyde dehydrogenase (NAD(+))-like [Jatropha curcas]
swissprot
ID Q6Z351
description Putative aldehyde oxidase-like protein OS=Oryza sativa subsp. japonica GN=Os07g0281700 PE=3 SV=1
trembl
ID A0A067LEI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23867 PE=4 SV=1
Gene Ontology
ID GO:0004031
description abscisic-aldehyde oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22353: 52872-72354 , PASA_asmbl_22354: 54547-54905 , PASA_asmbl_22355: 52875-119383
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000216_020 0.0 - - PREDICTED: benzaldehyde dehydrogenase (NAD(+))-like [Jatropha curcas]
2 Hb_000059_130 0.0799712977 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 1 [Jatropha curcas]
3 Hb_003506_020 0.1018418165 - - PREDICTED: uncharacterized protein LOC105125881 isoform X1 [Populus euphratica]
4 Hb_000371_060 0.1031332829 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
5 Hb_000270_230 0.1168839971 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
6 Hb_008667_060 0.1177389057 - - Magnesium and cobalt efflux protein corC, putative [Ricinus communis]
7 Hb_000069_780 0.1182244628 - - atpob1, putative [Ricinus communis]
8 Hb_002447_150 0.1200612763 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
9 Hb_001699_150 0.1218768091 - - hypothetical protein POPTR_0009s13450g [Populus trichocarpa]
10 Hb_000133_090 0.1237430059 - - PREDICTED: uncharacterized protein LOC105629320 [Jatropha curcas]
11 Hb_011310_200 0.1237658225 - - grr1, plant, putative [Ricinus communis]
12 Hb_008226_100 0.1239532792 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
13 Hb_089100_040 0.1254398237 - - PREDICTED: uncharacterized protein LOC105638961 [Jatropha curcas]
14 Hb_000676_040 0.1265164429 - - hypothetical protein POPTR_0007s13320g [Populus trichocarpa]
15 Hb_000473_150 0.1272481083 - - PREDICTED: pullulanase 1, chloroplastic [Jatropha curcas]
16 Hb_004162_120 0.127387957 - - PREDICTED: vacuolar protein sorting-associated protein 41 homolog [Populus euphratica]
17 Hb_001251_060 0.1280843479 - - aldo/keto reductase AKR [Manihot esculenta]
18 Hb_000362_090 0.1297185268 - - PREDICTED: uncharacterized protein LOC105635736 isoform X1 [Jatropha curcas]
19 Hb_001561_010 0.1304936411 - - PREDICTED: uncharacterized protein LOC105635045 isoform X1 [Jatropha curcas]
20 Hb_002122_080 0.1305119644 - - -

Gene co-expression network

sample Hb_000216_020 Hb_000216_020 Hb_000059_130 Hb_000059_130 Hb_000216_020--Hb_000059_130 Hb_003506_020 Hb_003506_020 Hb_000216_020--Hb_003506_020 Hb_000371_060 Hb_000371_060 Hb_000216_020--Hb_000371_060 Hb_000270_230 Hb_000270_230 Hb_000216_020--Hb_000270_230 Hb_008667_060 Hb_008667_060 Hb_000216_020--Hb_008667_060 Hb_000069_780 Hb_000069_780 Hb_000216_020--Hb_000069_780 Hb_000059_130--Hb_008667_060 Hb_000473_150 Hb_000473_150 Hb_000059_130--Hb_000473_150 Hb_000805_190 Hb_000805_190 Hb_000059_130--Hb_000805_190 Hb_000059_130--Hb_000069_780 Hb_000059_130--Hb_000371_060 Hb_000000_120 Hb_000000_120 Hb_003506_020--Hb_000000_120 Hb_005970_010 Hb_005970_010 Hb_003506_020--Hb_005970_010 Hb_002122_080 Hb_002122_080 Hb_003506_020--Hb_002122_080 Hb_002151_100 Hb_002151_100 Hb_003506_020--Hb_002151_100 Hb_028077_020 Hb_028077_020 Hb_003506_020--Hb_028077_020 Hb_001414_040 Hb_001414_040 Hb_000371_060--Hb_001414_040 Hb_002524_020 Hb_002524_020 Hb_000371_060--Hb_002524_020 Hb_001259_120 Hb_001259_120 Hb_000371_060--Hb_001259_120 Hb_001195_350 Hb_001195_350 Hb_000371_060--Hb_001195_350 Hb_001257_100 Hb_001257_100 Hb_000371_060--Hb_001257_100 Hb_000270_230--Hb_000069_780 Hb_000856_020 Hb_000856_020 Hb_000270_230--Hb_000856_020 Hb_000676_040 Hb_000676_040 Hb_000270_230--Hb_000676_040 Hb_000270_230--Hb_001257_100 Hb_006054_030 Hb_006054_030 Hb_000270_230--Hb_006054_030 Hb_000941_080 Hb_000941_080 Hb_000270_230--Hb_000941_080 Hb_002477_120 Hb_002477_120 Hb_008667_060--Hb_002477_120 Hb_008667_060--Hb_000676_040 Hb_002471_140 Hb_002471_140 Hb_008667_060--Hb_002471_140 Hb_008667_060--Hb_002524_020 Hb_000345_340 Hb_000345_340 Hb_008667_060--Hb_000345_340 Hb_000069_780--Hb_006054_030 Hb_001369_780 Hb_001369_780 Hb_000069_780--Hb_001369_780 Hb_002387_040 Hb_002387_040 Hb_000069_780--Hb_002387_040 Hb_003752_120 Hb_003752_120 Hb_000069_780--Hb_003752_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.31042 34.739 8.10419 17.1884 6.08261 6.38491
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.63444 2.96408 2.4123 18.469 8.43992

CAGE analysis