Hb_012180_010

Information

Type -
Description -
Location Contig12180: 10795-16851
Sequence    

Annotation

kegg
ID tcc:TCM_015847
description Ureidoglycine aminohydrolase isoform 1
nr
ID XP_012070110.1
description PREDICTED: (S)-ureidoglycine aminohydrolase [Jatropha curcas]
swissprot
ID Q8GXV5
description (S)-ureidoglycine aminohydrolase OS=Arabidopsis thaliana GN=UGLYAH PE=1 SV=1
trembl
ID A0A067KUY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03493 PE=4 SV=1
Gene Ontology
ID GO:0003700
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06615: 10824-13632 , PASA_asmbl_06616: 10845-16835 , PASA_asmbl_06617: 13880-16664 , PASA_asmbl_06618: 13155-16775
cDNA
(Sanger)
(ID:Location)		 007_D16.ab1: 14684-16662 , 025_B10.ab1: 14660-16662

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012180_010 0.0 - - PREDICTED: (S)-ureidoglycine aminohydrolase [Jatropha curcas]
2 Hb_188063_050 0.0917706101 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
3 Hb_000098_050 0.0942076816 - - BnaCnng11900D [Brassica napus]
4 Hb_001085_080 0.0964052994 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
5 Hb_007137_050 0.0988745864 - - Uncharacterized protein isoform 1 [Theobroma cacao]
6 Hb_005970_010 0.0990192228 - - PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 isoform X2 [Jatropha curcas]
7 Hb_000622_110 0.1024810336 - - cmp-sialic acid transporter, putative [Ricinus communis]
8 Hb_000836_300 0.1031929523 - - caax prenyl protease ste24, putative [Ricinus communis]
9 Hb_001159_030 0.1062206849 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
10 Hb_000243_300 0.1062326491 - - catalytic, putative [Ricinus communis]
11 Hb_000205_280 0.1089508123 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
12 Hb_015026_130 0.1106553321 - - quinone oxidoreductase, putative [Ricinus communis]
13 Hb_001097_040 0.1108131499 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
14 Hb_000579_130 0.1111848541 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_001558_040 0.1123620965 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
16 Hb_005062_110 0.1139151139 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
17 Hb_000297_030 0.1142323334 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
18 Hb_000320_290 0.1146058159 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
19 Hb_006502_030 0.115679046 - - PREDICTED: probable kinetochore protein ndc80 [Jatropha curcas]
20 Hb_044486_020 0.1166442607 - - CASTOR protein [Glycine max]

Gene co-expression network

sample Hb_012180_010 Hb_012180_010 Hb_188063_050 Hb_188063_050 Hb_012180_010--Hb_188063_050 Hb_000098_050 Hb_000098_050 Hb_012180_010--Hb_000098_050 Hb_001085_080 Hb_001085_080 Hb_012180_010--Hb_001085_080 Hb_007137_050 Hb_007137_050 Hb_012180_010--Hb_007137_050 Hb_005970_010 Hb_005970_010 Hb_012180_010--Hb_005970_010 Hb_000622_110 Hb_000622_110 Hb_012180_010--Hb_000622_110 Hb_188063_050--Hb_007137_050 Hb_000320_290 Hb_000320_290 Hb_188063_050--Hb_000320_290 Hb_000258_110 Hb_000258_110 Hb_188063_050--Hb_000258_110 Hb_086063_020 Hb_086063_020 Hb_188063_050--Hb_086063_020 Hb_002740_090 Hb_002740_090 Hb_188063_050--Hb_002740_090 Hb_000243_300 Hb_000243_300 Hb_188063_050--Hb_000243_300 Hb_009247_010 Hb_009247_010 Hb_000098_050--Hb_009247_010 Hb_000098_050--Hb_000320_290 Hb_005062_110 Hb_005062_110 Hb_000098_050--Hb_005062_110 Hb_000085_260 Hb_000085_260 Hb_000098_050--Hb_000085_260 Hb_000890_030 Hb_000890_030 Hb_000098_050--Hb_000890_030 Hb_044486_020 Hb_044486_020 Hb_000098_050--Hb_044486_020 Hb_001097_040 Hb_001097_040 Hb_001085_080--Hb_001097_040 Hb_000579_130 Hb_000579_130 Hb_001085_080--Hb_000579_130 Hb_001558_040 Hb_001558_040 Hb_001085_080--Hb_001558_040 Hb_158845_060 Hb_158845_060 Hb_001085_080--Hb_158845_060 Hb_002739_120 Hb_002739_120 Hb_001085_080--Hb_002739_120 Hb_001811_170 Hb_001811_170 Hb_001085_080--Hb_001811_170 Hb_000085_450 Hb_000085_450 Hb_007137_050--Hb_000085_450 Hb_007137_050--Hb_001097_040 Hb_010042_030 Hb_010042_030 Hb_007137_050--Hb_010042_030 Hb_007137_050--Hb_002740_090 Hb_007137_050--Hb_000579_130 Hb_005970_010--Hb_001085_080 Hb_000000_120 Hb_000000_120 Hb_005970_010--Hb_000000_120 Hb_005970_010--Hb_001097_040 Hb_003506_020 Hb_003506_020 Hb_005970_010--Hb_003506_020 Hb_028077_020 Hb_028077_020 Hb_005970_010--Hb_028077_020 Hb_000256_230 Hb_000256_230 Hb_000622_110--Hb_000256_230 Hb_000622_110--Hb_005062_110 Hb_002486_050 Hb_002486_050 Hb_000622_110--Hb_002486_050 Hb_000926_340 Hb_000926_340 Hb_000622_110--Hb_000926_340 Hb_003209_130 Hb_003209_130 Hb_000622_110--Hb_003209_130 Hb_086639_080 Hb_086639_080 Hb_000622_110--Hb_086639_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.50375 12.7265 11.7302 23.2575 8.8752 8.87374
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.19618 4.06012 2.79063 15.8881 6.26994

CAGE analysis