Hb_000009_120

Information

Type -
Description -
Location Contig9: 125366-132566
Sequence    

Annotation

kegg
ID rcu:RCOM_0553210
description xaa-pro aminopeptidase, putative (EC:3.4.11.9)
nr
ID XP_012079078.1
description PREDICTED: probable Xaa-Pro aminopeptidase P isoform X1 [Jatropha curcas]
swissprot
ID D1ZKF3
description Probable Xaa-Pro aminopeptidase P OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=AMPP PE=3 SV=1
trembl
ID A0A067K6F8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12262 PE=3 SV=1
Gene Ontology
ID GO:0005829
description probable xaa-pro aminopeptidase p

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61836: 125407-132450 , PASA_asmbl_61839: 131628-131848
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_120 0.0 - - PREDICTED: probable Xaa-Pro aminopeptidase P isoform X1 [Jatropha curcas]
2 Hb_003849_240 0.0687556165 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
3 Hb_001414_040 0.0817664262 - - PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha curcas]
4 Hb_002889_020 0.0819363132 - - PREDICTED: mitogen-activated protein kinase kinase 3 [Jatropha curcas]
5 Hb_005333_050 0.0875794567 - - PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic [Jatropha curcas]
6 Hb_006829_100 0.0883018728 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000080_110 0.0909830906 - - PREDICTED: GPI ethanolamine phosphate transferase 3 isoform X1 [Jatropha curcas]
8 Hb_000049_250 0.0919639305 - - PREDICTED: uncharacterized protein LOC105644455 isoform X1 [Jatropha curcas]
9 Hb_002631_200 0.0969851923 - - PREDICTED: uncharacterized protein LOC105646171 isoform X2 [Jatropha curcas]
10 Hb_007765_030 0.0993097078 - - PREDICTED: neutral ceramidase [Jatropha curcas]
11 Hb_000321_090 0.1007601618 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Jatropha curcas]
12 Hb_000395_220 0.1011471561 - - PREDICTED: LOW QUALITY PROTEIN: ultraviolet-B receptor UVR8 [Jatropha curcas]
13 Hb_007747_170 0.1025206226 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
14 Hb_001322_180 0.1025265953 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 26 [Jatropha curcas]
15 Hb_002276_040 0.1063604778 - - PREDICTED: sodium-coupled neutral amino acid transporter 3-like [Jatropha curcas]
16 Hb_001953_120 0.1065306283 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
17 Hb_006531_020 0.1066920835 - - PREDICTED: autophagy-related protein 13 [Jatropha curcas]
18 Hb_083799_010 0.1068500257 - - ubiquitin-protein ligase, putative [Ricinus communis]
19 Hb_005074_020 0.1076495543 - - PREDICTED: uncharacterized protein LOC105644455 isoform X1 [Jatropha curcas]
20 Hb_019840_030 0.1082582907 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000009_120 Hb_000009_120 Hb_003849_240 Hb_003849_240 Hb_000009_120--Hb_003849_240 Hb_001414_040 Hb_001414_040 Hb_000009_120--Hb_001414_040 Hb_002889_020 Hb_002889_020 Hb_000009_120--Hb_002889_020 Hb_005333_050 Hb_005333_050 Hb_000009_120--Hb_005333_050 Hb_006829_100 Hb_006829_100 Hb_000009_120--Hb_006829_100 Hb_000080_110 Hb_000080_110 Hb_000009_120--Hb_000080_110 Hb_002005_090 Hb_002005_090 Hb_003849_240--Hb_002005_090 Hb_001031_090 Hb_001031_090 Hb_003849_240--Hb_001031_090 Hb_007765_030 Hb_007765_030 Hb_003849_240--Hb_007765_030 Hb_000395_220 Hb_000395_220 Hb_003849_240--Hb_000395_220 Hb_003849_240--Hb_005333_050 Hb_006907_140 Hb_006907_140 Hb_001414_040--Hb_006907_140 Hb_000371_060 Hb_000371_060 Hb_001414_040--Hb_000371_060 Hb_001414_040--Hb_007765_030 Hb_001341_160 Hb_001341_160 Hb_001414_040--Hb_001341_160 Hb_001259_120 Hb_001259_120 Hb_001414_040--Hb_001259_120 Hb_000003_100 Hb_000003_100 Hb_002889_020--Hb_000003_100 Hb_000331_580 Hb_000331_580 Hb_002889_020--Hb_000331_580 Hb_011618_090 Hb_011618_090 Hb_002889_020--Hb_011618_090 Hb_012286_040 Hb_012286_040 Hb_002889_020--Hb_012286_040 Hb_019840_030 Hb_019840_030 Hb_002889_020--Hb_019840_030 Hb_001167_050 Hb_001167_050 Hb_002889_020--Hb_001167_050 Hb_002046_010 Hb_002046_010 Hb_005333_050--Hb_002046_010 Hb_005333_050--Hb_019840_030 Hb_000022_150 Hb_000022_150 Hb_005333_050--Hb_000022_150 Hb_039946_050 Hb_039946_050 Hb_005333_050--Hb_039946_050 Hb_005333_050--Hb_002889_020 Hb_007747_170 Hb_007747_170 Hb_006829_100--Hb_007747_170 Hb_001322_180 Hb_001322_180 Hb_006829_100--Hb_001322_180 Hb_007426_140 Hb_007426_140 Hb_006829_100--Hb_007426_140 Hb_006829_100--Hb_019840_030 Hb_000834_230 Hb_000834_230 Hb_006829_100--Hb_000834_230 Hb_000321_090 Hb_000321_090 Hb_000080_110--Hb_000321_090 Hb_005074_020 Hb_005074_020 Hb_000080_110--Hb_005074_020 Hb_033799_010 Hb_033799_010 Hb_000080_110--Hb_033799_010 Hb_000049_250 Hb_000049_250 Hb_000080_110--Hb_000049_250 Hb_011925_020 Hb_011925_020 Hb_000080_110--Hb_011925_020 Hb_006478_030 Hb_006478_030 Hb_000080_110--Hb_006478_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.4887 46.9789 22.9789 25.8994 18.104 16.8473
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.1457 7.6348 17.8529 60.5379 25.3644

CAGE analysis