Hb_145655_010

Information

Type -
Description -
Location Contig145655: 1293-1553
Sequence    

Annotation

kegg
ID pop:POPTR_0009s01280g
description POPTRDRAFT_749645; lactoylglutathione lyase family protein
nr
ID XP_012064721.1
description PREDICTED: lactoylglutathione lyase [Jatropha curcas]
swissprot
ID Q8H0V3
description Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1
trembl
ID A0A067L685
description Lactoylglutathione lyase OS=Jatropha curcas GN=JCGZ_05453 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145655_010 0.0 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
2 Hb_005539_370 0.2076719011 - - ring finger protein, putative [Ricinus communis]
3 Hb_022174_010 0.240959296 - - elicitor-responsive protein [Hevea brasiliensis]
4 Hb_000424_080 0.244118764 - - PREDICTED: endoglucanase 16 [Jatropha curcas]
5 Hb_000174_050 0.2666675292 - - PREDICTED: gamma-tubulin complex component 2 [Populus euphratica]
6 Hb_000522_140 0.2675524837 - - protein transporter, putative [Ricinus communis]
7 Hb_004225_110 0.2740696738 - - PREDICTED: ABC transporter G family member 28 [Jatropha curcas]
8 Hb_000074_100 0.2742859649 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000184_160 0.2797432022 - - PREDICTED: uncharacterized protein LOC105647991 [Jatropha curcas]
10 Hb_002570_010 0.2841346211 - - hypothetical protein JCGZ_25329 [Jatropha curcas]
11 Hb_001367_010 0.2856543071 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
12 Hb_000359_300 0.2874753527 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 [Zea mays]
13 Hb_012606_010 0.288777932 transcription factor TF Family: IWS1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c isoform X2 [Jatropha curcas]
14 Hb_024074_020 0.2891542544 - - PREDICTED: probable serine/threonine-protein kinase At1g09600 [Jatropha curcas]
15 Hb_026048_050 0.2910148763 - - PREDICTED: probable membrane-associated kinase regulator 2 [Jatropha curcas]
16 Hb_011671_080 0.2954046314 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
17 Hb_005293_020 0.2964670645 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000016_050 0.2964902638 - - PREDICTED: uncharacterized protein LOC105648535 [Jatropha curcas]
19 Hb_107495_040 0.2967026562 - - PREDICTED: 12-oxophytodienoate reductase 2-like [Citrus sinensis]
20 Hb_003605_040 0.2981448805 - - PREDICTED: somatic embryogenesis receptor kinase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_145655_010 Hb_145655_010 Hb_005539_370 Hb_005539_370 Hb_145655_010--Hb_005539_370 Hb_022174_010 Hb_022174_010 Hb_145655_010--Hb_022174_010 Hb_000424_080 Hb_000424_080 Hb_145655_010--Hb_000424_080 Hb_000174_050 Hb_000174_050 Hb_145655_010--Hb_000174_050 Hb_000522_140 Hb_000522_140 Hb_145655_010--Hb_000522_140 Hb_004225_110 Hb_004225_110 Hb_145655_010--Hb_004225_110 Hb_001377_430 Hb_001377_430 Hb_005539_370--Hb_001377_430 Hb_066778_010 Hb_066778_010 Hb_005539_370--Hb_066778_010 Hb_007810_090 Hb_007810_090 Hb_005539_370--Hb_007810_090 Hb_007632_100 Hb_007632_100 Hb_005539_370--Hb_007632_100 Hb_004774_030 Hb_004774_030 Hb_005539_370--Hb_004774_030 Hb_000258_150 Hb_000258_150 Hb_022174_010--Hb_000258_150 Hb_013399_080 Hb_013399_080 Hb_022174_010--Hb_013399_080 Hb_000069_670 Hb_000069_670 Hb_022174_010--Hb_000069_670 Hb_000096_080 Hb_000096_080 Hb_022174_010--Hb_000096_080 Hb_000207_100 Hb_000207_100 Hb_022174_010--Hb_000207_100 Hb_001001_050 Hb_001001_050 Hb_000424_080--Hb_001001_050 Hb_000424_080--Hb_022174_010 Hb_002235_270 Hb_002235_270 Hb_000424_080--Hb_002235_270 Hb_000640_140 Hb_000640_140 Hb_000424_080--Hb_000640_140 Hb_000979_010 Hb_000979_010 Hb_000424_080--Hb_000979_010 Hb_000684_260 Hb_000684_260 Hb_000174_050--Hb_000684_260 Hb_002960_150 Hb_002960_150 Hb_000174_050--Hb_002960_150 Hb_002217_380 Hb_002217_380 Hb_000174_050--Hb_002217_380 Hb_086022_010 Hb_086022_010 Hb_000174_050--Hb_086022_010 Hb_000916_070 Hb_000916_070 Hb_000174_050--Hb_000916_070 Hb_010655_020 Hb_010655_020 Hb_000174_050--Hb_010655_020 Hb_000850_040 Hb_000850_040 Hb_000522_140--Hb_000850_040 Hb_000099_210 Hb_000099_210 Hb_000522_140--Hb_000099_210 Hb_000136_130 Hb_000136_130 Hb_000522_140--Hb_000136_130 Hb_002235_130 Hb_002235_130 Hb_000522_140--Hb_002235_130 Hb_002265_030 Hb_002265_030 Hb_000522_140--Hb_002265_030 Hb_010964_020 Hb_010964_020 Hb_000522_140--Hb_010964_020 Hb_017014_010 Hb_017014_010 Hb_004225_110--Hb_017014_010 Hb_009913_040 Hb_009913_040 Hb_004225_110--Hb_009913_040 Hb_010003_010 Hb_010003_010 Hb_004225_110--Hb_010003_010 Hb_000049_080 Hb_000049_080 Hb_004225_110--Hb_000049_080 Hb_000889_100 Hb_000889_100 Hb_004225_110--Hb_000889_100 Hb_000094_290 Hb_000094_290 Hb_004225_110--Hb_000094_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.53707 0 2.1469 6.68972 1.12579 1.28031
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.86144 0.980497 0.403795 1.02622

CAGE analysis