Hb_000207_100

Information

Type -
Description -
Location Contig207: 141433-148213
Sequence    

Annotation

kegg
ID tcc:TCM_036375
description ATP-binding casette family G25
nr
ID XP_012065776.1
description PREDICTED: ABC transporter G family member 25 [Jatropha curcas]
swissprot
ID Q84TH5
description ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1
trembl
ID A0A067LFS7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25470 PE=4 SV=1
Gene Ontology
ID GO:0005886
description abc transporter g family member 25

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000207_100 0.0 - - PREDICTED: ABC transporter G family member 25 [Jatropha curcas]
2 Hb_001318_200 0.1357361685 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
3 Hb_000281_110 0.1388499563 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
4 Hb_000096_080 0.1399472091 - - PREDICTED: putative glycosyltransferase 7 [Jatropha curcas]
5 Hb_000554_010 0.1525627463 - - transporter, putative [Ricinus communis]
6 Hb_002078_160 0.1603979246 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
7 Hb_000556_150 0.1636663514 - - PREDICTED: fasciclin-like arabinogalactan protein 10 [Populus euphratica]
8 Hb_001318_190 0.1677638951 - - PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
9 Hb_000521_160 0.1699292478 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001124_020 0.1714463578 - - PREDICTED: protein yippee-like At4g27745 [Jatropha curcas]
11 Hb_000012_430 0.1732642648 - - calcineurin B, putative [Ricinus communis]
12 Hb_000025_090 0.1748237499 - - tubulin beta chain, putative [Ricinus communis]
13 Hb_004375_130 0.1753087692 - - kinesin heavy chain, putative [Ricinus communis]
14 Hb_005023_010 0.178739149 - - PREDICTED: putative lipase ROG1 [Jatropha curcas]
15 Hb_000146_050 0.1797689273 - - PREDICTED: protein unc-50 homolog isoform X2 [Gossypium raimondii]
16 Hb_004466_040 0.1806587335 - - PREDICTED: protein RER1B-like [Gossypium raimondii]
17 Hb_090051_030 0.1825991381 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
18 Hb_000197_210 0.1835947288 - - phosphatidylinositol transporter, putative [Ricinus communis]
19 Hb_003376_050 0.1860900395 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
20 Hb_000670_050 0.1864628715 transcription factor TF Family: MYB hypothetical protein JCGZ_16088 [Jatropha curcas]

Gene co-expression network

sample Hb_000207_100 Hb_000207_100 Hb_001318_200 Hb_001318_200 Hb_000207_100--Hb_001318_200 Hb_000281_110 Hb_000281_110 Hb_000207_100--Hb_000281_110 Hb_000096_080 Hb_000096_080 Hb_000207_100--Hb_000096_080 Hb_000554_010 Hb_000554_010 Hb_000207_100--Hb_000554_010 Hb_002078_160 Hb_002078_160 Hb_000207_100--Hb_002078_160 Hb_000556_150 Hb_000556_150 Hb_000207_100--Hb_000556_150 Hb_026228_020 Hb_026228_020 Hb_001318_200--Hb_026228_020 Hb_005023_030 Hb_005023_030 Hb_001318_200--Hb_005023_030 Hb_001318_190 Hb_001318_190 Hb_001318_200--Hb_001318_190 Hb_181810_020 Hb_181810_020 Hb_001318_200--Hb_181810_020 Hb_001135_140 Hb_001135_140 Hb_001318_200--Hb_001135_140 Hb_000281_110--Hb_000554_010 Hb_003206_070 Hb_003206_070 Hb_000281_110--Hb_003206_070 Hb_003032_010 Hb_003032_010 Hb_000281_110--Hb_003032_010 Hb_001454_130 Hb_001454_130 Hb_000281_110--Hb_001454_130 Hb_001633_130 Hb_001633_130 Hb_000281_110--Hb_001633_130 Hb_000169_090 Hb_000169_090 Hb_000281_110--Hb_000169_090 Hb_000096_080--Hb_000556_150 Hb_004375_130 Hb_004375_130 Hb_000096_080--Hb_004375_130 Hb_000096_080--Hb_002078_160 Hb_007904_210 Hb_007904_210 Hb_000096_080--Hb_007904_210 Hb_000096_080--Hb_000554_010 Hb_004007_160 Hb_004007_160 Hb_000554_010--Hb_004007_160 Hb_004705_040 Hb_004705_040 Hb_000554_010--Hb_004705_040 Hb_000554_010--Hb_004375_130 Hb_007479_050 Hb_007479_050 Hb_000554_010--Hb_007479_050 Hb_000649_050 Hb_000649_050 Hb_000554_010--Hb_000649_050 Hb_004223_190 Hb_004223_190 Hb_002078_160--Hb_004223_190 Hb_001640_030 Hb_001640_030 Hb_002078_160--Hb_001640_030 Hb_090051_030 Hb_090051_030 Hb_002078_160--Hb_090051_030 Hb_000705_120 Hb_000705_120 Hb_002078_160--Hb_000705_120 Hb_152202_010 Hb_152202_010 Hb_002078_160--Hb_152202_010 Hb_003994_280 Hb_003994_280 Hb_002078_160--Hb_003994_280 Hb_000392_370 Hb_000392_370 Hb_000556_150--Hb_000392_370 Hb_005463_130 Hb_005463_130 Hb_000556_150--Hb_005463_130 Hb_086022_010 Hb_086022_010 Hb_000556_150--Hb_086022_010 Hb_007919_080 Hb_007919_080 Hb_000556_150--Hb_007919_080 Hb_001501_080 Hb_001501_080 Hb_000556_150--Hb_001501_080 Hb_000556_150--Hb_007904_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.509603 0.145218 0.248942 0.881732 0.498797 0.535556
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.29177 0.247233 0.502388 0.0281016 0.149306

CAGE analysis