Hb_001633_130

Information

Type -
Description -
Location Contig1633: 94732-98482
Sequence    

Annotation

kegg
ID rcu:RCOM_1445520
description phosphoglycerate mutase, putative
nr
ID XP_012067337.1
description PREDICTED: uncharacterized protein LOC105630200 [Jatropha curcas]
swissprot
ID B1WAX6
description Fructose-2,6-bisphosphatase TIGAR OS=Xenopus tropicalis GN=tigar PE=2 SV=1
trembl
ID A0A067L3P9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26861 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14892: 94703-98439 , PASA_asmbl_14893: 96382-96640
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001633_130 0.0 - - PREDICTED: uncharacterized protein LOC105630200 [Jatropha curcas]
2 Hb_082821_010 0.0385939703 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
3 Hb_090051_030 0.0547420339 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
4 Hb_000146_050 0.065903365 - - PREDICTED: protein unc-50 homolog isoform X2 [Gossypium raimondii]
5 Hb_006455_120 0.067480587 - - n6-DNA-methyltransferase, putative [Ricinus communis]
6 Hb_001159_130 0.070319186 - - PREDICTED: protein cornichon homolog 4 [Jatropha curcas]
7 Hb_003177_030 0.0753743916 - - PREDICTED: uncharacterized protein LOC105635357 [Jatropha curcas]
8 Hb_005144_160 0.0767707869 - - PREDICTED: uncharacterized protein LOC105628018 isoform X1 [Jatropha curcas]
9 Hb_002445_120 0.0797677574 - - secretory carrier membrane protein, putative [Ricinus communis]
10 Hb_000453_160 0.0801092157 - - vacuolar protein sorting 26, vps26, putative [Ricinus communis]
11 Hb_001252_130 0.0809737181 - - PREDICTED: protein YIPF1 homolog [Jatropha curcas]
12 Hb_005023_010 0.0809754282 - - PREDICTED: putative lipase ROG1 [Jatropha curcas]
13 Hb_000019_030 0.0812188333 - - PREDICTED: V-type proton ATPase subunit C [Gossypium raimondii]
14 Hb_006618_120 0.0820422432 - - PREDICTED: uncharacterized protein LOC105645969 [Jatropha curcas]
15 Hb_002863_050 0.0826356604 - - aldose 1-epimerase, putative [Ricinus communis]
16 Hb_003750_050 0.0832870792 - - PREDICTED: THO complex subunit 4D isoform X1 [Jatropha curcas]
17 Hb_030736_020 0.0843726846 - - conserved hypothetical protein [Ricinus communis]
18 Hb_007904_200 0.0854651205 - - protein binding protein, putative [Ricinus communis]
19 Hb_000594_050 0.0858795183 - - PREDICTED: pH-response regulator protein palA/RIM20 isoform X1 [Jatropha curcas]
20 Hb_000580_180 0.0863568917 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001633_130 Hb_001633_130 Hb_082821_010 Hb_082821_010 Hb_001633_130--Hb_082821_010 Hb_090051_030 Hb_090051_030 Hb_001633_130--Hb_090051_030 Hb_000146_050 Hb_000146_050 Hb_001633_130--Hb_000146_050 Hb_006455_120 Hb_006455_120 Hb_001633_130--Hb_006455_120 Hb_001159_130 Hb_001159_130 Hb_001633_130--Hb_001159_130 Hb_003177_030 Hb_003177_030 Hb_001633_130--Hb_003177_030 Hb_082821_010--Hb_090051_030 Hb_082821_010--Hb_006455_120 Hb_007904_200 Hb_007904_200 Hb_082821_010--Hb_007904_200 Hb_002863_050 Hb_002863_050 Hb_082821_010--Hb_002863_050 Hb_002235_250 Hb_002235_250 Hb_082821_010--Hb_002235_250 Hb_090051_030--Hb_000146_050 Hb_005023_010 Hb_005023_010 Hb_090051_030--Hb_005023_010 Hb_033642_030 Hb_033642_030 Hb_090051_030--Hb_033642_030 Hb_090051_030--Hb_006455_120 Hb_012322_020 Hb_012322_020 Hb_000146_050--Hb_012322_020 Hb_158062_010 Hb_158062_010 Hb_000146_050--Hb_158062_010 Hb_000603_150 Hb_000603_150 Hb_000146_050--Hb_000603_150 Hb_000205_300 Hb_000205_300 Hb_000146_050--Hb_000205_300 Hb_006634_070 Hb_006634_070 Hb_006455_120--Hb_006634_070 Hb_011037_030 Hb_011037_030 Hb_006455_120--Hb_011037_030 Hb_000300_500 Hb_000300_500 Hb_006455_120--Hb_000300_500 Hb_006455_120--Hb_000603_150 Hb_000580_180 Hb_000580_180 Hb_006455_120--Hb_000580_180 Hb_000156_010 Hb_000156_010 Hb_006455_120--Hb_000156_010 Hb_000116_270 Hb_000116_270 Hb_001159_130--Hb_000116_270 Hb_155159_020 Hb_155159_020 Hb_001159_130--Hb_155159_020 Hb_001159_130--Hb_003177_030 Hb_001159_130--Hb_000603_150 Hb_000200_020 Hb_000200_020 Hb_001159_130--Hb_000200_020 Hb_000019_030 Hb_000019_030 Hb_001159_130--Hb_000019_030 Hb_000749_220 Hb_000749_220 Hb_003177_030--Hb_000749_220 Hb_001009_270 Hb_001009_270 Hb_003177_030--Hb_001009_270 Hb_005144_160 Hb_005144_160 Hb_003177_030--Hb_005144_160 Hb_000676_250 Hb_000676_250 Hb_003177_030--Hb_000676_250 Hb_003177_030--Hb_000019_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.6533 5.20793 8.91538 15.6227 10.4877 14.0733
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.35524 11.1844 12.8387 6.68191 7.66367

CAGE analysis