Hb_000205_300

Information

Type -
Description -
Location Contig205: 346533-353939
Sequence    

Annotation

kegg
ID cic:CICLE_v10030905mg
description hypothetical protein
nr
ID XP_012089380.1
description PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
swissprot
ID F4KFT7
description Probable aminopyrimidine aminohydrolase, mitochondrial OS=Arabidopsis thaliana GN=TNEA_C PE=2 SV=1
trembl
ID A9PFH4
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s03960g PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21145: 346914-353962
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000205_300 0.0 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
2 Hb_000603_150 0.0615924966 - - PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Jatropha curcas]
3 Hb_004310_020 0.0658075007 - - PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Jatropha curcas]
4 Hb_158062_010 0.0662803638 - - PREDICTED: uncharacterized protein LOC105634413 [Jatropha curcas]
5 Hb_000120_670 0.0665838116 - - PREDICTED: SRSF protein kinase 2-like [Jatropha curcas]
6 Hb_003693_070 0.0711877334 - - PREDICTED: S-(hydroxymethyl)glutathione dehydrogenase [Jatropha curcas]
7 Hb_010712_030 0.071960034 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004767_100 0.0728226126 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
9 Hb_004032_150 0.0734333797 - - PREDICTED: chaperone protein dnaJ 10-like [Jatropha curcas]
10 Hb_011671_240 0.0763643559 - - PREDICTED: WD repeat-containing protein WRAP73-like [Jatropha curcas]
11 Hb_007059_010 0.0763840569 - - PREDICTED: uncharacterized protein LOC105642418 [Jatropha curcas]
12 Hb_000146_050 0.0768380689 - - PREDICTED: protein unc-50 homolog isoform X2 [Gossypium raimondii]
13 Hb_143629_210 0.0768823038 - - PREDICTED: transcription factor PIF3 isoform X1 [Jatropha curcas]
14 Hb_005170_040 0.0769383208 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
15 Hb_000019_030 0.077756458 - - PREDICTED: V-type proton ATPase subunit C [Gossypium raimondii]
16 Hb_000630_050 0.0788419317 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001635_090 0.0798544489 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
18 Hb_007416_280 0.0803583118 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000120_060 0.0818580372 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Populus euphratica]
20 Hb_000808_280 0.0823672905 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000205_300 Hb_000205_300 Hb_000603_150 Hb_000603_150 Hb_000205_300--Hb_000603_150 Hb_004310_020 Hb_004310_020 Hb_000205_300--Hb_004310_020 Hb_158062_010 Hb_158062_010 Hb_000205_300--Hb_158062_010 Hb_000120_670 Hb_000120_670 Hb_000205_300--Hb_000120_670 Hb_003693_070 Hb_003693_070 Hb_000205_300--Hb_003693_070 Hb_010712_030 Hb_010712_030 Hb_000205_300--Hb_010712_030 Hb_006455_120 Hb_006455_120 Hb_000603_150--Hb_006455_120 Hb_001159_130 Hb_001159_130 Hb_000603_150--Hb_001159_130 Hb_000603_150--Hb_000120_670 Hb_000580_180 Hb_000580_180 Hb_000603_150--Hb_000580_180 Hb_003549_150 Hb_003549_150 Hb_000603_150--Hb_003549_150 Hb_004310_020--Hb_010712_030 Hb_004310_020--Hb_158062_010 Hb_001135_130 Hb_001135_130 Hb_004310_020--Hb_001135_130 Hb_001051_080 Hb_001051_080 Hb_004310_020--Hb_001051_080 Hb_004310_020--Hb_003549_150 Hb_007059_010 Hb_007059_010 Hb_158062_010--Hb_007059_010 Hb_000146_050 Hb_000146_050 Hb_158062_010--Hb_000146_050 Hb_003964_070 Hb_003964_070 Hb_158062_010--Hb_003964_070 Hb_158062_010--Hb_003549_150 Hb_003750_050 Hb_003750_050 Hb_000120_670--Hb_003750_050 Hb_000120_670--Hb_000580_180 Hb_000120_670--Hb_003964_070 Hb_000019_030 Hb_000019_030 Hb_000120_670--Hb_000019_030 Hb_001279_150 Hb_001279_150 Hb_000120_670--Hb_001279_150 Hb_000345_240 Hb_000345_240 Hb_000120_670--Hb_000345_240 Hb_000120_060 Hb_000120_060 Hb_003693_070--Hb_000120_060 Hb_010142_030 Hb_010142_030 Hb_003693_070--Hb_010142_030 Hb_000808_280 Hb_000808_280 Hb_003693_070--Hb_000808_280 Hb_004046_050 Hb_004046_050 Hb_003693_070--Hb_004046_050 Hb_003693_070--Hb_000019_030 Hb_000099_080 Hb_000099_080 Hb_010712_030--Hb_000099_080 Hb_000125_130 Hb_000125_130 Hb_010712_030--Hb_000125_130 Hb_000152_380 Hb_000152_380 Hb_010712_030--Hb_000152_380 Hb_001408_040 Hb_001408_040 Hb_010712_030--Hb_001408_040 Hb_010712_030--Hb_007059_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.7512 8.59523 7.27581 13.932 10.977 16.2231
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.7016 10.2019 12.6307 10.0351 3.96194

CAGE analysis