Hb_181810_020

Information

Type -
Description -
Location Contig181810: 914-1557
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_181810_020 0.0 - - -
2 Hb_000031_150 0.1294117576 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
3 Hb_003050_390 0.1311341117 - - PREDICTED: uncharacterized protein LOC104442543 [Eucalyptus grandis]
4 Hb_002232_100 0.1370354197 - - vacuolar ATPase F subunit [Hevea brasiliensis]
5 Hb_000229_040 0.138190099 - - Secretory carrier membrane protein (SCAMP) family protein isoform 2 [Theobroma cacao]
6 Hb_000592_080 0.1388462036 - - PREDICTED: thymidylate kinase [Jatropha curcas]
7 Hb_143629_210 0.1418456609 - - PREDICTED: transcription factor PIF3 isoform X1 [Jatropha curcas]
8 Hb_001135_130 0.1425234684 - - hypothetical protein CISIN_1g0171752mg, partial [Citrus sinensis]
9 Hb_001047_030 0.1441428798 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
10 Hb_001232_160 0.1457382474 - - PREDICTED: protein SYS1 homolog [Gossypium raimondii]
11 Hb_005170_040 0.1460078492 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
12 Hb_145314_010 0.1462492554 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
13 Hb_007904_200 0.1466577971 - - protein binding protein, putative [Ricinus communis]
14 Hb_000205_300 0.1475276239 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
15 Hb_011671_240 0.1477495489 - - PREDICTED: WD repeat-containing protein WRAP73-like [Jatropha curcas]
16 Hb_021409_020 0.1479356638 - - PREDICTED: protein yippee-like At4g27745 [Malus domestica]
17 Hb_034506_010 0.147945727 - - PREDICTED: protein OS-9 homolog [Jatropha curcas]
18 Hb_000710_020 0.1494494696 - - PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Populus euphratica]
19 Hb_002508_020 0.1505001583 - - PREDICTED: SNF1-related protein kinase regulatory subunit beta-1 [Jatropha curcas]
20 Hb_008511_050 0.1516701315 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_181810_020 Hb_181810_020 Hb_000031_150 Hb_000031_150 Hb_181810_020--Hb_000031_150 Hb_003050_390 Hb_003050_390 Hb_181810_020--Hb_003050_390 Hb_002232_100 Hb_002232_100 Hb_181810_020--Hb_002232_100 Hb_000229_040 Hb_000229_040 Hb_181810_020--Hb_000229_040 Hb_000592_080 Hb_000592_080 Hb_181810_020--Hb_000592_080 Hb_143629_210 Hb_143629_210 Hb_181810_020--Hb_143629_210 Hb_002811_060 Hb_002811_060 Hb_000031_150--Hb_002811_060 Hb_000933_060 Hb_000933_060 Hb_000031_150--Hb_000933_060 Hb_001047_030 Hb_001047_030 Hb_000031_150--Hb_001047_030 Hb_004306_080 Hb_004306_080 Hb_000031_150--Hb_004306_080 Hb_000031_150--Hb_003050_390 Hb_001691_120 Hb_001691_120 Hb_000031_150--Hb_001691_120 Hb_000270_510 Hb_000270_510 Hb_003050_390--Hb_000270_510 Hb_000080_150 Hb_000080_150 Hb_003050_390--Hb_000080_150 Hb_000270_520 Hb_000270_520 Hb_003050_390--Hb_000270_520 Hb_001135_130 Hb_001135_130 Hb_003050_390--Hb_001135_130 Hb_003528_010 Hb_003528_010 Hb_003050_390--Hb_003528_010 Hb_004204_170 Hb_004204_170 Hb_003050_390--Hb_004204_170 Hb_010457_030 Hb_010457_030 Hb_002232_100--Hb_010457_030 Hb_007904_200 Hb_007904_200 Hb_002232_100--Hb_007904_200 Hb_011671_240 Hb_011671_240 Hb_002232_100--Hb_011671_240 Hb_000451_010 Hb_000451_010 Hb_002232_100--Hb_000451_010 Hb_000010_330 Hb_000010_330 Hb_002232_100--Hb_000010_330 Hb_002506_020 Hb_002506_020 Hb_002232_100--Hb_002506_020 Hb_021409_020 Hb_021409_020 Hb_000229_040--Hb_021409_020 Hb_003195_060 Hb_003195_060 Hb_000229_040--Hb_003195_060 Hb_168000_010 Hb_168000_010 Hb_000229_040--Hb_168000_010 Hb_004545_060 Hb_004545_060 Hb_000229_040--Hb_004545_060 Hb_000045_090 Hb_000045_090 Hb_000229_040--Hb_000045_090 Hb_022250_130 Hb_022250_130 Hb_000229_040--Hb_022250_130 Hb_008864_110 Hb_008864_110 Hb_000592_080--Hb_008864_110 Hb_002400_470 Hb_002400_470 Hb_000592_080--Hb_002400_470 Hb_001348_050 Hb_001348_050 Hb_000592_080--Hb_001348_050 Hb_000592_080--Hb_001047_030 Hb_000976_320 Hb_000976_320 Hb_000592_080--Hb_000976_320 Hb_000710_020 Hb_000710_020 Hb_000592_080--Hb_000710_020 Hb_000808_270 Hb_000808_270 Hb_143629_210--Hb_000808_270 Hb_003464_050 Hb_003464_050 Hb_143629_210--Hb_003464_050 Hb_004032_150 Hb_004032_150 Hb_143629_210--Hb_004032_150 Hb_000618_040 Hb_000618_040 Hb_143629_210--Hb_000618_040 Hb_143629_210--Hb_000010_330 Hb_143629_210--Hb_000451_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.37089 1.68875 1.88141 3.37629 3.03406 5.02376
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.55818 1.66916 4.68056 1.16018 0.412963

CAGE analysis