Hb_001691_120

Information

Type desease resistance
Description Gene Name: AAA
Location Contig1691: 183383-192894
Sequence    

Annotation

kegg
ID pop:POPTR_0004s04380g
description POPTRDRAFT_831118; Vesicle-fusing ATPase family protein
nr
ID XP_012091606.1
description PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
swissprot
ID Q9M0Y8
description Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2
trembl
ID A0A067JN78
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21445 PE=3 SV=1
Gene Ontology
ID GO:0005524
description vesicle-fusing atpase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15723: 183271-206006
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001691_120 0.0 desease resistance Gene Name: AAA PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
2 Hb_005054_100 0.0809144943 - - PREDICTED: uncharacterized protein At2g39920 [Jatropha curcas]
3 Hb_005679_050 0.082867709 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_000169_090 0.0894584494 - - PREDICTED: sodium/hydrogen exchanger 2-like [Jatropha curcas]
5 Hb_002811_060 0.0896394657 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
6 Hb_009535_020 0.0919651386 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
7 Hb_028639_010 0.0931357712 - - transporter, putative [Ricinus communis]
8 Hb_000679_150 0.0942811109 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 56 isoform X2 [Fragaria vesca subsp. vesca]
9 Hb_023001_060 0.0954342933 - - PREDICTED: importin-11 [Jatropha curcas]
10 Hb_002493_020 0.0987754912 - - PREDICTED: uncharacterized protein At4g26450 isoform X3 [Jatropha curcas]
11 Hb_004732_020 0.0987844185 - - PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1 [Populus euphratica]
12 Hb_004102_140 0.1017662628 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007192_080 0.1022125963 - - PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Jatropha curcas]
14 Hb_000032_100 0.1029891535 - - PREDICTED: hydroquinone glucosyltransferase [Vitis vinifera]
15 Hb_090804_010 0.1040128113 - - ATP-dependent RNA helicase, putative [Ricinus communis]
16 Hb_001266_080 0.1054244224 - - PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Jatropha curcas]
17 Hb_000048_140 0.1056124611 - - PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X3 [Jatropha curcas]
18 Hb_003777_310 0.1056342872 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005147_060 0.1065739164 - - PREDICTED: shaggy-related protein kinase kappa [Populus euphratica]
20 Hb_007904_160 0.1069030131 - - PREDICTED: T-complex protein 1 subunit epsilon [Jatropha curcas]

Gene co-expression network

sample Hb_001691_120 Hb_001691_120 Hb_005054_100 Hb_005054_100 Hb_001691_120--Hb_005054_100 Hb_005679_050 Hb_005679_050 Hb_001691_120--Hb_005679_050 Hb_000169_090 Hb_000169_090 Hb_001691_120--Hb_000169_090 Hb_002811_060 Hb_002811_060 Hb_001691_120--Hb_002811_060 Hb_009535_020 Hb_009535_020 Hb_001691_120--Hb_009535_020 Hb_028639_010 Hb_028639_010 Hb_001691_120--Hb_028639_010 Hb_005054_100--Hb_002811_060 Hb_002740_180 Hb_002740_180 Hb_005054_100--Hb_002740_180 Hb_012022_090 Hb_012022_090 Hb_005054_100--Hb_012022_090 Hb_005054_100--Hb_000169_090 Hb_005490_030 Hb_005490_030 Hb_005054_100--Hb_005490_030 Hb_023001_060 Hb_023001_060 Hb_005054_100--Hb_023001_060 Hb_002493_020 Hb_002493_020 Hb_005679_050--Hb_002493_020 Hb_001700_040 Hb_001700_040 Hb_005679_050--Hb_001700_040 Hb_001617_060 Hb_001617_060 Hb_005679_050--Hb_001617_060 Hb_003966_030 Hb_003966_030 Hb_005679_050--Hb_003966_030 Hb_067345_010 Hb_067345_010 Hb_005679_050--Hb_067345_010 Hb_004046_020 Hb_004046_020 Hb_000169_090--Hb_004046_020 Hb_001344_010 Hb_001344_010 Hb_000169_090--Hb_001344_010 Hb_003195_070 Hb_003195_070 Hb_000169_090--Hb_003195_070 Hb_000898_040 Hb_000898_040 Hb_000169_090--Hb_000898_040 Hb_003206_070 Hb_003206_070 Hb_000169_090--Hb_003206_070 Hb_002811_060--Hb_012022_090 Hb_000116_500 Hb_000116_500 Hb_002811_060--Hb_000116_500 Hb_003988_010 Hb_003988_010 Hb_002811_060--Hb_003988_010 Hb_000608_320 Hb_000608_320 Hb_002811_060--Hb_000608_320 Hb_006660_010 Hb_006660_010 Hb_002811_060--Hb_006660_010 Hb_000600_070 Hb_000600_070 Hb_009535_020--Hb_000600_070 Hb_000023_190 Hb_000023_190 Hb_009535_020--Hb_000023_190 Hb_028487_110 Hb_028487_110 Hb_009535_020--Hb_028487_110 Hb_009535_020--Hb_028639_010 Hb_004218_240 Hb_004218_240 Hb_009535_020--Hb_004218_240 Hb_000567_050 Hb_000567_050 Hb_009535_020--Hb_000567_050 Hb_000048_140 Hb_000048_140 Hb_028639_010--Hb_000048_140 Hb_002200_130 Hb_002200_130 Hb_028639_010--Hb_002200_130 Hb_003090_080 Hb_003090_080 Hb_028639_010--Hb_003090_080 Hb_028639_010--Hb_000600_070 Hb_000173_510 Hb_000173_510 Hb_028639_010--Hb_000173_510
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
51.5748 20.7888 15.4172 46.7196 51.1079 94.1067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.9324 21.9639 59.2645 44.8912 30.4371

CAGE analysis