Hb_001318_190

Information

Type -
Description -
Location Contig1318: 151324-151737
Sequence    

Annotation

kegg
ID cit:102617255
description uncharacterized LOC102617255
nr
ID XP_006470496.1
description PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
swissprot
ID -
description -
trembl
ID B9RYQ2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1312540 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001318_190 0.0 - - PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
2 Hb_001318_200 0.1623914613 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
3 Hb_000207_100 0.1677638951 - - PREDICTED: ABC transporter G family member 25 [Jatropha curcas]
4 Hb_000008_220 0.1985140296 transcription factor TF Family: ARF PREDICTED: auxin response factor 10 [Jatropha curcas]
5 Hb_009851_050 0.2009070224 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
6 Hb_000556_150 0.2024392365 - - PREDICTED: fasciclin-like arabinogalactan protein 10 [Populus euphratica]
7 Hb_181810_020 0.20535878 - - -
8 Hb_135831_010 0.2106831719 - - hypothetical protein JCGZ_13374 [Jatropha curcas]
9 Hb_002498_050 0.2107118281 - - PREDICTED: aspartic proteinase-like [Jatropha curcas]
10 Hb_002078_160 0.2120923768 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
11 Hb_143243_010 0.2129635332 - - PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
12 Hb_002828_020 0.2129646887 - - protein binding protein, putative [Ricinus communis]
13 Hb_145314_010 0.2131054587 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
14 Hb_000281_110 0.2132454313 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
15 Hb_000096_080 0.2136463587 - - PREDICTED: putative glycosyltransferase 7 [Jatropha curcas]
16 Hb_000212_320 0.2149829163 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
17 Hb_001357_040 0.2158766245 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
18 Hb_000035_200 0.2161705468 - - PREDICTED: phospholipase D Z-like [Jatropha curcas]
19 Hb_004466_040 0.2186540032 - - PREDICTED: protein RER1B-like [Gossypium raimondii]
20 Hb_002876_320 0.2201113432 - - PREDICTED: uncharacterized protein LOC105632052 [Jatropha curcas]

Gene co-expression network

sample Hb_001318_190 Hb_001318_190 Hb_001318_200 Hb_001318_200 Hb_001318_190--Hb_001318_200 Hb_000207_100 Hb_000207_100 Hb_001318_190--Hb_000207_100 Hb_000008_220 Hb_000008_220 Hb_001318_190--Hb_000008_220 Hb_009851_050 Hb_009851_050 Hb_001318_190--Hb_009851_050 Hb_000556_150 Hb_000556_150 Hb_001318_190--Hb_000556_150 Hb_181810_020 Hb_181810_020 Hb_001318_190--Hb_181810_020 Hb_026228_020 Hb_026228_020 Hb_001318_200--Hb_026228_020 Hb_001318_200--Hb_000207_100 Hb_005023_030 Hb_005023_030 Hb_001318_200--Hb_005023_030 Hb_001318_200--Hb_181810_020 Hb_001135_140 Hb_001135_140 Hb_001318_200--Hb_001135_140 Hb_000281_110 Hb_000281_110 Hb_000207_100--Hb_000281_110 Hb_000096_080 Hb_000096_080 Hb_000207_100--Hb_000096_080 Hb_000554_010 Hb_000554_010 Hb_000207_100--Hb_000554_010 Hb_002078_160 Hb_002078_160 Hb_000207_100--Hb_002078_160 Hb_000207_100--Hb_000556_150 Hb_002876_320 Hb_002876_320 Hb_000008_220--Hb_002876_320 Hb_001948_130 Hb_001948_130 Hb_000008_220--Hb_001948_130 Hb_000009_400 Hb_000009_400 Hb_000008_220--Hb_000009_400 Hb_005000_320 Hb_005000_320 Hb_000008_220--Hb_005000_320 Hb_058999_030 Hb_058999_030 Hb_000008_220--Hb_058999_030 Hb_000760_020 Hb_000760_020 Hb_000008_220--Hb_000760_020 Hb_000008_270 Hb_000008_270 Hb_009851_050--Hb_000008_270 Hb_002631_070 Hb_002631_070 Hb_009851_050--Hb_002631_070 Hb_017295_010 Hb_017295_010 Hb_009851_050--Hb_017295_010 Hb_003994_280 Hb_003994_280 Hb_009851_050--Hb_003994_280 Hb_028707_080 Hb_028707_080 Hb_009851_050--Hb_028707_080 Hb_009529_030 Hb_009529_030 Hb_009851_050--Hb_009529_030 Hb_000392_370 Hb_000392_370 Hb_000556_150--Hb_000392_370 Hb_005463_130 Hb_005463_130 Hb_000556_150--Hb_005463_130 Hb_086022_010 Hb_086022_010 Hb_000556_150--Hb_086022_010 Hb_007919_080 Hb_007919_080 Hb_000556_150--Hb_007919_080 Hb_001501_080 Hb_001501_080 Hb_000556_150--Hb_001501_080 Hb_007904_210 Hb_007904_210 Hb_000556_150--Hb_007904_210 Hb_000031_150 Hb_000031_150 Hb_181810_020--Hb_000031_150 Hb_003050_390 Hb_003050_390 Hb_181810_020--Hb_003050_390 Hb_002232_100 Hb_002232_100 Hb_181810_020--Hb_002232_100 Hb_000229_040 Hb_000229_040 Hb_181810_020--Hb_000229_040 Hb_000592_080 Hb_000592_080 Hb_181810_020--Hb_000592_080 Hb_143629_210 Hb_143629_210 Hb_181810_020--Hb_143629_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.678693 0.678838 0.650133 2.47531 1.59503 1.42174
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.12022 0.146647 1.42293 0.187326 0.260669

CAGE analysis