Hb_000096_080

Information

Type -
Description -
Location Contig96: 71282-72664
Sequence    

Annotation

kegg
ID rcu:RCOM_0581290
description transferase, putative (EC:2.4.2.39)
nr
ID XP_012079430.1
description PREDICTED: putative glycosyltransferase 7 [Jatropha curcas]
swissprot
ID O81007
description Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7 PE=2 SV=1
trembl
ID A0A067K769
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12552 PE=4 SV=1
Gene Ontology
ID GO:0016021
description glycosyltransferase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63688: 70838-72697 , PASA_asmbl_63689: 73427-78493
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000096_080 0.0 - - PREDICTED: putative glycosyltransferase 7 [Jatropha curcas]
2 Hb_000556_150 0.1324389083 - - PREDICTED: fasciclin-like arabinogalactan protein 10 [Populus euphratica]
3 Hb_004375_130 0.13750117 - - kinesin heavy chain, putative [Ricinus communis]
4 Hb_000207_100 0.1399472091 - - PREDICTED: ABC transporter G family member 25 [Jatropha curcas]
5 Hb_002078_160 0.1427650452 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
6 Hb_007904_210 0.1438367932 - - PREDICTED: oxysterol-binding protein-related protein 1D [Jatropha curcas]
7 Hb_000554_010 0.1521543198 - - transporter, putative [Ricinus communis]
8 Hb_000281_110 0.1543933999 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
9 Hb_004223_190 0.1554924354 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
10 Hb_000056_040 0.1567428307 - - PREDICTED: protein IQ-DOMAIN 31 [Jatropha curcas]
11 Hb_000300_690 0.1620051845 - - hypothetical protein JCGZ_02719 [Jatropha curcas]
12 Hb_000392_370 0.164892774 - - PREDICTED: protein IQ-DOMAIN 31-like [Jatropha curcas]
13 Hb_009851_050 0.172791229 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
14 Hb_003376_050 0.1732669514 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
15 Hb_000853_260 0.1744000004 - - PREDICTED: probable galacturonosyltransferase-like 7 [Jatropha curcas]
16 Hb_013399_080 0.1748907089 - - PREDICTED: protein Brevis radix-like 2 [Jatropha curcas]
17 Hb_004007_160 0.1787272794 - - PREDICTED: formin-like protein 6 [Jatropha curcas]
18 Hb_003872_010 0.1802684205 - - hypothetical protein PRUPE_ppa013215mg [Prunus persica]
19 Hb_000086_200 0.1810059219 - - ABC transporter family protein [Hevea brasiliensis]
20 Hb_000322_090 0.1829484236 - - diacylglycerol O-acyltransferase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000096_080 Hb_000096_080 Hb_000556_150 Hb_000556_150 Hb_000096_080--Hb_000556_150 Hb_004375_130 Hb_004375_130 Hb_000096_080--Hb_004375_130 Hb_000207_100 Hb_000207_100 Hb_000096_080--Hb_000207_100 Hb_002078_160 Hb_002078_160 Hb_000096_080--Hb_002078_160 Hb_007904_210 Hb_007904_210 Hb_000096_080--Hb_007904_210 Hb_000554_010 Hb_000554_010 Hb_000096_080--Hb_000554_010 Hb_000392_370 Hb_000392_370 Hb_000556_150--Hb_000392_370 Hb_005463_130 Hb_005463_130 Hb_000556_150--Hb_005463_130 Hb_086022_010 Hb_086022_010 Hb_000556_150--Hb_086022_010 Hb_007919_080 Hb_007919_080 Hb_000556_150--Hb_007919_080 Hb_001501_080 Hb_001501_080 Hb_000556_150--Hb_001501_080 Hb_000556_150--Hb_007904_210 Hb_004375_130--Hb_000554_010 Hb_003376_050 Hb_003376_050 Hb_004375_130--Hb_003376_050 Hb_002769_020 Hb_002769_020 Hb_004375_130--Hb_002769_020 Hb_004375_130--Hb_000392_370 Hb_004705_040 Hb_004705_040 Hb_004375_130--Hb_004705_040 Hb_001318_200 Hb_001318_200 Hb_000207_100--Hb_001318_200 Hb_000281_110 Hb_000281_110 Hb_000207_100--Hb_000281_110 Hb_000207_100--Hb_000554_010 Hb_000207_100--Hb_002078_160 Hb_000207_100--Hb_000556_150 Hb_004223_190 Hb_004223_190 Hb_002078_160--Hb_004223_190 Hb_001640_030 Hb_001640_030 Hb_002078_160--Hb_001640_030 Hb_090051_030 Hb_090051_030 Hb_002078_160--Hb_090051_030 Hb_000705_120 Hb_000705_120 Hb_002078_160--Hb_000705_120 Hb_152202_010 Hb_152202_010 Hb_002078_160--Hb_152202_010 Hb_003994_280 Hb_003994_280 Hb_002078_160--Hb_003994_280 Hb_000300_600 Hb_000300_600 Hb_007904_210--Hb_000300_600 Hb_003206_090 Hb_003206_090 Hb_007904_210--Hb_003206_090 Hb_000072_090 Hb_000072_090 Hb_007904_210--Hb_000072_090 Hb_000371_090 Hb_000371_090 Hb_007904_210--Hb_000371_090 Hb_000022_200 Hb_000022_200 Hb_007904_210--Hb_000022_200 Hb_004007_160 Hb_004007_160 Hb_000554_010--Hb_004007_160 Hb_000554_010--Hb_004705_040 Hb_000554_010--Hb_000281_110 Hb_007479_050 Hb_007479_050 Hb_000554_010--Hb_007479_050 Hb_000649_050 Hb_000649_050 Hb_000554_010--Hb_000649_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
34.6946 5.49653 14.4598 40.9811 28.7003 17.7729
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.7583 5.96509 22.2399 3.7753 16.3733

CAGE analysis