Hb_000069_670

Information

Type -
Description -
Location Contig69: 706425-707948
Sequence    

Annotation

kegg
ID rcu:RCOM_0149590
description hypothetical protein
nr
ID XP_012083261.1
description PREDICTED: uncharacterized protein LOC105642887 [Jatropha curcas]
swissprot
ID Q9XII1
description Plastid division protein PDV2 OS=Arabidopsis thaliana GN=PDV2 PE=1 SV=1
trembl
ID A0A067K9N0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14295 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54288: 706349-707825
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_670 0.0 - - PREDICTED: uncharacterized protein LOC105642887 [Jatropha curcas]
2 Hb_054132_010 0.1756704809 - - PREDICTED: transmembrane protein 136-like isoform X2 [Pyrus x bretschneideri]
3 Hb_000138_170 0.176727647 - - putative plastid-lipid-associated protein, partial [Hevea brasiliensis]
4 Hb_000243_080 0.1896647324 - - PREDICTED: beta-galactosidase 3 [Jatropha curcas]
5 Hb_000554_010 0.1926600376 - - transporter, putative [Ricinus communis]
6 Hb_001439_200 0.1980069103 - - Transmembrane protein Tmp21 precursor, putative [Ricinus communis]
7 Hb_000826_090 0.1983869015 - - PREDICTED: cationic peroxidase 1-like [Populus euphratica]
8 Hb_000032_440 0.2015755191 - - protein with unknown function [Ricinus communis]
9 Hb_019516_080 0.203012561 - - conserved hypothetical protein [Ricinus communis]
10 Hb_079483_020 0.204374718 - - PREDICTED: mannan endo-1,4-beta-mannosidase 2-like isoform X2 [Jatropha curcas]
11 Hb_011671_080 0.2064319925 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
12 Hb_000983_040 0.2072590337 - - PREDICTED: transmembrane protein 136 [Jatropha curcas]
13 Hb_004116_020 0.208498752 - - fad NAD binding oxidoreductases, putative [Ricinus communis]
14 Hb_004007_160 0.2096280161 - - PREDICTED: formin-like protein 6 [Jatropha curcas]
15 Hb_022174_010 0.2099345147 - - elicitor-responsive protein [Hevea brasiliensis]
16 Hb_004204_140 0.2125588897 transcription factor TF Family: C2H2 hypothetical protein RCOM_1470470 [Ricinus communis]
17 Hb_000281_110 0.2134082079 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
18 Hb_009646_040 0.2138682422 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_002284_310 0.214953203 - - PREDICTED: uncharacterized protein LOC105635220 isoform X2 [Jatropha curcas]
20 Hb_000521_160 0.2154184763 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000069_670 Hb_000069_670 Hb_054132_010 Hb_054132_010 Hb_000069_670--Hb_054132_010 Hb_000138_170 Hb_000138_170 Hb_000069_670--Hb_000138_170 Hb_000243_080 Hb_000243_080 Hb_000069_670--Hb_000243_080 Hb_000554_010 Hb_000554_010 Hb_000069_670--Hb_000554_010 Hb_001439_200 Hb_001439_200 Hb_000069_670--Hb_001439_200 Hb_000826_090 Hb_000826_090 Hb_000069_670--Hb_000826_090 Hb_000983_040 Hb_000983_040 Hb_054132_010--Hb_000983_040 Hb_006442_020 Hb_006442_020 Hb_054132_010--Hb_006442_020 Hb_004191_020 Hb_004191_020 Hb_054132_010--Hb_004191_020 Hb_079483_020 Hb_079483_020 Hb_054132_010--Hb_079483_020 Hb_004619_080 Hb_004619_080 Hb_054132_010--Hb_004619_080 Hb_002221_070 Hb_002221_070 Hb_054132_010--Hb_002221_070 Hb_000138_170--Hb_000243_080 Hb_000138_170--Hb_000826_090 Hb_000138_170--Hb_006442_020 Hb_003894_080 Hb_003894_080 Hb_000138_170--Hb_003894_080 Hb_111985_110 Hb_111985_110 Hb_000138_170--Hb_111985_110 Hb_019516_080 Hb_019516_080 Hb_000138_170--Hb_019516_080 Hb_000243_080--Hb_019516_080 Hb_000914_170 Hb_000914_170 Hb_000243_080--Hb_000914_170 Hb_000103_320 Hb_000103_320 Hb_000243_080--Hb_000103_320 Hb_003687_150 Hb_003687_150 Hb_000243_080--Hb_003687_150 Hb_000272_140 Hb_000272_140 Hb_000243_080--Hb_000272_140 Hb_004007_160 Hb_004007_160 Hb_000554_010--Hb_004007_160 Hb_004705_040 Hb_004705_040 Hb_000554_010--Hb_004705_040 Hb_004375_130 Hb_004375_130 Hb_000554_010--Hb_004375_130 Hb_000281_110 Hb_000281_110 Hb_000554_010--Hb_000281_110 Hb_007479_050 Hb_007479_050 Hb_000554_010--Hb_007479_050 Hb_000649_050 Hb_000649_050 Hb_000554_010--Hb_000649_050 Hb_001439_200--Hb_002221_070 Hb_001439_200--Hb_019516_080 Hb_000161_060 Hb_000161_060 Hb_001439_200--Hb_000161_060 Hb_006846_060 Hb_006846_060 Hb_001439_200--Hb_006846_060 Hb_000046_320 Hb_000046_320 Hb_001439_200--Hb_000046_320 Hb_007904_260 Hb_007904_260 Hb_001439_200--Hb_007904_260 Hb_012340_050 Hb_012340_050 Hb_000826_090--Hb_012340_050 Hb_002411_040 Hb_002411_040 Hb_000826_090--Hb_002411_040 Hb_019762_020 Hb_019762_020 Hb_000826_090--Hb_019762_020 Hb_000826_090--Hb_111985_110 Hb_000826_090--Hb_079483_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.4589 0.156067 2.59336 13.1291 2.39358 4.2555
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.47027 5.71945 9.33904 0.626424 5.57446

CAGE analysis