Hb_000826_090

Information

Type -
Description -
Location Contig826: 192358-194257
Sequence    

Annotation

kegg
ID pop:POPTR_0013s15050g
description POPTRDRAFT_239931; peroxidase family protein
nr
ID XP_011021015.1
description PREDICTED: cationic peroxidase 1-like [Populus euphratica]
swissprot
ID P22195
description Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2
trembl
ID W8PVV9
description Peroxidase OS=Populus trichocarpa GN=PRX72 PE=2 SV=1
Gene Ontology
ID GO:0004601
description cationic peroxidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000826_090 0.0 - - PREDICTED: cationic peroxidase 1-like [Populus euphratica]
2 Hb_000138_170 0.1471138693 - - putative plastid-lipid-associated protein, partial [Hevea brasiliensis]
3 Hb_012340_050 0.1499574047 - - PREDICTED: actin-related protein 5 [Jatropha curcas]
4 Hb_002411_040 0.1593312032 - - PREDICTED: cysteine proteinase inhibitor 6 [Jatropha curcas]
5 Hb_019762_020 0.1639480661 - - PREDICTED: selenoprotein K-like [Nicotiana tomentosiformis]
6 Hb_111985_110 0.1707685665 - - thioredoxin H-type 3 [Hevea brasiliensis]
7 Hb_079483_020 0.17400807 - - PREDICTED: mannan endo-1,4-beta-mannosidase 2-like isoform X2 [Jatropha curcas]
8 Hb_006442_020 0.1762608267 - - PREDICTED: very-long-chain enoyl-CoA reductase [Jatropha curcas]
9 Hb_008790_030 0.1794690928 - - PREDICTED: probable magnesium transporter NIPA9 [Jatropha curcas]
10 Hb_000733_080 0.1811491167 - - PREDICTED: uncharacterized protein LOC105646960 [Jatropha curcas]
11 Hb_003052_050 0.1811527973 - - PREDICTED: LAG1 longevity assurance homolog 3 [Jatropha curcas]
12 Hb_004116_020 0.182079967 - - fad NAD binding oxidoreductases, putative [Ricinus communis]
13 Hb_010931_130 0.1867043225 - - PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
14 Hb_002221_070 0.1876651875 - - beta-glucanase, putative [Ricinus communis]
15 Hb_000069_740 0.188303207 - - Esterase precursor, putative [Ricinus communis]
16 Hb_000331_200 0.1892965551 - - PREDICTED: adenylate kinase 4 [Jatropha curcas]
17 Hb_001153_150 0.1898981727 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A reductase HMG-CoA synthase 2 [Hevea brasiliensis]
18 Hb_032208_070 0.190681829 - - PREDICTED: probable polyamine transporter At3g13620 isoform X2 [Jatropha curcas]
19 Hb_000243_080 0.1917947153 - - PREDICTED: beta-galactosidase 3 [Jatropha curcas]
20 Hb_004129_140 0.1918810418 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 [Jatropha curcas]

Gene co-expression network

sample Hb_000826_090 Hb_000826_090 Hb_000138_170 Hb_000138_170 Hb_000826_090--Hb_000138_170 Hb_012340_050 Hb_012340_050 Hb_000826_090--Hb_012340_050 Hb_002411_040 Hb_002411_040 Hb_000826_090--Hb_002411_040 Hb_019762_020 Hb_019762_020 Hb_000826_090--Hb_019762_020 Hb_111985_110 Hb_111985_110 Hb_000826_090--Hb_111985_110 Hb_079483_020 Hb_079483_020 Hb_000826_090--Hb_079483_020 Hb_000243_080 Hb_000243_080 Hb_000138_170--Hb_000243_080 Hb_006442_020 Hb_006442_020 Hb_000138_170--Hb_006442_020 Hb_003894_080 Hb_003894_080 Hb_000138_170--Hb_003894_080 Hb_000138_170--Hb_111985_110 Hb_019516_080 Hb_019516_080 Hb_000138_170--Hb_019516_080 Hb_000107_300 Hb_000107_300 Hb_012340_050--Hb_000107_300 Hb_005144_010 Hb_005144_010 Hb_012340_050--Hb_005144_010 Hb_000826_100 Hb_000826_100 Hb_012340_050--Hb_000826_100 Hb_002314_010 Hb_002314_010 Hb_012340_050--Hb_002314_010 Hb_000365_250 Hb_000365_250 Hb_012340_050--Hb_000365_250 Hb_006452_110 Hb_006452_110 Hb_012340_050--Hb_006452_110 Hb_002411_040--Hb_019762_020 Hb_000331_200 Hb_000331_200 Hb_002411_040--Hb_000331_200 Hb_002601_110 Hb_002601_110 Hb_002411_040--Hb_002601_110 Hb_000317_390 Hb_000317_390 Hb_002411_040--Hb_000317_390 Hb_001703_060 Hb_001703_060 Hb_002411_040--Hb_001703_060 Hb_008790_030 Hb_008790_030 Hb_002411_040--Hb_008790_030 Hb_026314_020 Hb_026314_020 Hb_019762_020--Hb_026314_020 Hb_017413_010 Hb_017413_010 Hb_019762_020--Hb_017413_010 Hb_003025_040 Hb_003025_040 Hb_019762_020--Hb_003025_040 Hb_005278_020 Hb_005278_020 Hb_019762_020--Hb_005278_020 Hb_004784_020 Hb_004784_020 Hb_019762_020--Hb_004784_020 Hb_021409_080 Hb_021409_080 Hb_111985_110--Hb_021409_080 Hb_000417_100 Hb_000417_100 Hb_111985_110--Hb_000417_100 Hb_000407_070 Hb_000407_070 Hb_111985_110--Hb_000407_070 Hb_004627_030 Hb_004627_030 Hb_111985_110--Hb_004627_030 Hb_012305_130 Hb_012305_130 Hb_111985_110--Hb_012305_130 Hb_006573_290 Hb_006573_290 Hb_111985_110--Hb_006573_290 Hb_004116_020 Hb_004116_020 Hb_079483_020--Hb_004116_020 Hb_003103_010 Hb_003103_010 Hb_079483_020--Hb_003103_010 Hb_054132_010 Hb_054132_010 Hb_079483_020--Hb_054132_010 Hb_002154_110 Hb_002154_110 Hb_079483_020--Hb_002154_110 Hb_001195_070 Hb_001195_070 Hb_079483_020--Hb_001195_070 Hb_113818_010 Hb_113818_010 Hb_079483_020--Hb_113818_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.460163 0.0987266 0.207235 0.990508 0.363561 0.115789
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.702467 0.552492 0.436058 0.0952027 0.403895

CAGE analysis