Hb_001703_060

Information

Type -
Description -
Location Contig1703: 132004-140163
Sequence    

Annotation

kegg
ID rcu:RCOM_0837790
description protein kinase, putative (EC:2.7.10.2)
nr
ID XP_002522482.1
description protein kinase, putative [Ricinus communis]
swissprot
ID P18160
description Dual specificity protein kinase splA OS=Dictyostelium discoideum GN=splA PE=1 SV=3
trembl
ID B9S913
description Protein kinase, putative OS=Ricinus communis GN=RCOM_0837790 PE=3 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase ht1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15930: 132091-139892
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001703_060 0.0 - - protein kinase, putative [Ricinus communis]
2 Hb_000331_200 0.0429261453 - - PREDICTED: adenylate kinase 4 [Jatropha curcas]
3 Hb_000030_030 0.0540144487 - - PREDICTED: ADP-glucose phosphorylase [Jatropha curcas]
4 Hb_000510_300 0.063267046 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Jatropha curcas]
5 Hb_001427_160 0.0692710831 - - o-methyltransferase, putative [Ricinus communis]
6 Hb_001225_080 0.0693787639 - - PREDICTED: ADP-ribosylation factor-like protein 8A [Populus euphratica]
7 Hb_000081_160 0.0720907134 - - PREDICTED: uncharacterized protein At4g17910 [Jatropha curcas]
8 Hb_168978_010 0.0760248613 - - PREDICTED: uncharacterized protein LOC105630751 [Jatropha curcas]
9 Hb_006059_050 0.0767610219 - - PREDICTED: polyadenylate-binding protein 1 [Jatropha curcas]
10 Hb_002301_150 0.0768117273 - - Drought-responsive family protein [Theobroma cacao]
11 Hb_000599_250 0.0789094512 - - hypothetical protein POPTR_0002s03730g [Populus trichocarpa]
12 Hb_003918_010 0.0812037906 - - PREDICTED: biotin--protein ligase 2-like [Jatropha curcas]
13 Hb_003502_060 0.0814081047 - - PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2 [Jatropha curcas]
14 Hb_152784_010 0.0830963621 - - hypothetical protein PRUPE_ppa010913mg [Prunus persica]
15 Hb_001159_130 0.0831238678 - - PREDICTED: protein cornichon homolog 4 [Jatropha curcas]
16 Hb_000703_350 0.0832504919 - - PREDICTED: WD repeat-containing protein 26-like [Jatropha curcas]
17 Hb_000317_390 0.0832975659 - - PREDICTED: vesicle transport protein SFT2B [Jatropha curcas]
18 Hb_005846_040 0.0843682224 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Populus euphratica]
19 Hb_001140_370 0.0850106885 - - PREDICTED: uncharacterized protein LOC105648463 [Jatropha curcas]
20 Hb_001252_130 0.0851879071 - - PREDICTED: protein YIPF1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_001703_060 Hb_001703_060 Hb_000331_200 Hb_000331_200 Hb_001703_060--Hb_000331_200 Hb_000030_030 Hb_000030_030 Hb_001703_060--Hb_000030_030 Hb_000510_300 Hb_000510_300 Hb_001703_060--Hb_000510_300 Hb_001427_160 Hb_001427_160 Hb_001703_060--Hb_001427_160 Hb_001225_080 Hb_001225_080 Hb_001703_060--Hb_001225_080 Hb_000081_160 Hb_000081_160 Hb_001703_060--Hb_000081_160 Hb_000317_390 Hb_000317_390 Hb_000331_200--Hb_000317_390 Hb_006693_020 Hb_006693_020 Hb_000331_200--Hb_006693_020 Hb_004108_070 Hb_004108_070 Hb_000331_200--Hb_004108_070 Hb_001140_370 Hb_001140_370 Hb_000331_200--Hb_001140_370 Hb_000221_160 Hb_000221_160 Hb_000331_200--Hb_000221_160 Hb_005846_040 Hb_005846_040 Hb_000030_030--Hb_005846_040 Hb_003502_060 Hb_003502_060 Hb_000030_030--Hb_003502_060 Hb_002232_410 Hb_002232_410 Hb_000030_030--Hb_002232_410 Hb_003151_040 Hb_003151_040 Hb_000030_030--Hb_003151_040 Hb_168978_010 Hb_168978_010 Hb_000030_030--Hb_168978_010 Hb_000783_010 Hb_000783_010 Hb_000510_300--Hb_000783_010 Hb_000510_300--Hb_001427_160 Hb_000510_300--Hb_168978_010 Hb_000720_040 Hb_000720_040 Hb_000510_300--Hb_000720_040 Hb_001366_370 Hb_001366_370 Hb_000510_300--Hb_001366_370 Hb_009787_030 Hb_009787_030 Hb_001427_160--Hb_009787_030 Hb_002053_140 Hb_002053_140 Hb_001427_160--Hb_002053_140 Hb_003994_230 Hb_003994_230 Hb_001427_160--Hb_003994_230 Hb_001427_160--Hb_001366_370 Hb_007101_300 Hb_007101_300 Hb_001225_080--Hb_007101_300 Hb_001225_080--Hb_000030_030 Hb_000406_080 Hb_000406_080 Hb_001225_080--Hb_000406_080 Hb_001225_080--Hb_000331_200 Hb_000032_380 Hb_000032_380 Hb_001225_080--Hb_000032_380 Hb_001252_130 Hb_001252_130 Hb_000081_160--Hb_001252_130 Hb_000215_110 Hb_000215_110 Hb_000081_160--Hb_000215_110 Hb_002641_060 Hb_002641_060 Hb_000081_160--Hb_002641_060 Hb_001318_280 Hb_001318_280 Hb_000081_160--Hb_001318_280 Hb_000431_170 Hb_000431_170 Hb_000081_160--Hb_000431_170 Hb_001599_040 Hb_001599_040 Hb_000081_160--Hb_001599_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.7588 11.944 14.7488 27.9163 14.7809 16.3187
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
30.1782 26.3022 20.3413 15.3295 12.7334

CAGE analysis