Hb_005144_010

Information

Type -
Description -
Location Contig5144: 553-7171
Sequence    

Annotation

kegg
ID cit:102608847
description lactoylglutathione lyase-like
nr
ID XP_012064721.1
description PREDICTED: lactoylglutathione lyase [Jatropha curcas]
swissprot
ID O49818
description Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1
trembl
ID A0A067L685
description Lactoylglutathione lyase OS=Jatropha curcas GN=JCGZ_05453 PE=3 SV=1
Gene Ontology
ID GO:0005829
description lactoylglutathione lyase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46423: 663-7179
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005144_010 0.0 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
2 Hb_012340_050 0.1083645495 - - PREDICTED: actin-related protein 5 [Jatropha curcas]
3 Hb_000365_250 0.1241392868 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002314_010 0.124339772 - - hypothetical protein JCGZ_15712 [Jatropha curcas]
5 Hb_000107_300 0.1294141886 - - PREDICTED: AP-1 complex subunit sigma-2 [Jatropha curcas]
6 Hb_045003_010 0.1384935899 - - Stomatin-1, putative [Ricinus communis]
7 Hb_145880_020 0.1400347072 - - PREDICTED: proteasome subunit alpha type-4 [Jatropha curcas]
8 Hb_000215_330 0.1487016807 - - PREDICTED: AP-4 complex subunit sigma [Jatropha curcas]
9 Hb_004230_020 0.1503975178 - - PREDICTED: uncharacterized protein LOC105648105 [Jatropha curcas]
10 Hb_004814_010 0.1505973258 - - PREDICTED: uncharacterized protein LOC105633486 [Jatropha curcas]
11 Hb_005306_070 0.1518070178 - - PREDICTED: coatomer subunit zeta-1-like [Jatropha curcas]
12 Hb_001208_040 0.1535546107 - - hypothetical protein CISIN_1g025613mg [Citrus sinensis]
13 Hb_002303_060 0.1568470775 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000384_070 0.1575349171 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001754_080 0.1586936913 - - PREDICTED: protein RALF-like 33 [Jatropha curcas]
16 Hb_001353_010 0.1588391236 - - PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial [Jatropha curcas]
17 Hb_005460_060 0.1590680307 - - PREDICTED: proteasome assembly chaperone 2 [Jatropha curcas]
18 Hb_000110_120 0.1591187809 - - PREDICTED: ras-related protein RABE1a [Fragaria vesca subsp. vesca]
19 Hb_002995_050 0.1603786699 - - PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Jatropha curcas]
20 Hb_001208_030 0.161088283 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005144_010 Hb_005144_010 Hb_012340_050 Hb_012340_050 Hb_005144_010--Hb_012340_050 Hb_000365_250 Hb_000365_250 Hb_005144_010--Hb_000365_250 Hb_002314_010 Hb_002314_010 Hb_005144_010--Hb_002314_010 Hb_000107_300 Hb_000107_300 Hb_005144_010--Hb_000107_300 Hb_045003_010 Hb_045003_010 Hb_005144_010--Hb_045003_010 Hb_145880_020 Hb_145880_020 Hb_005144_010--Hb_145880_020 Hb_012340_050--Hb_000107_300 Hb_000826_100 Hb_000826_100 Hb_012340_050--Hb_000826_100 Hb_012340_050--Hb_002314_010 Hb_012340_050--Hb_000365_250 Hb_006452_110 Hb_006452_110 Hb_012340_050--Hb_006452_110 Hb_000066_090 Hb_000066_090 Hb_000365_250--Hb_000066_090 Hb_000638_170 Hb_000638_170 Hb_000365_250--Hb_000638_170 Hb_002105_100 Hb_002105_100 Hb_000365_250--Hb_002105_100 Hb_000365_250--Hb_000107_300 Hb_000215_330 Hb_000215_330 Hb_002314_010--Hb_000215_330 Hb_002314_010--Hb_000107_300 Hb_002303_060 Hb_002303_060 Hb_002314_010--Hb_002303_060 Hb_005306_070 Hb_005306_070 Hb_002314_010--Hb_005306_070 Hb_001053_140 Hb_001053_140 Hb_002314_010--Hb_001053_140 Hb_003605_160 Hb_003605_160 Hb_002314_010--Hb_003605_160 Hb_000107_300--Hb_000215_330 Hb_003376_190 Hb_003376_190 Hb_000107_300--Hb_003376_190 Hb_000107_300--Hb_002303_060 Hb_000107_300--Hb_005306_070 Hb_000107_300--Hb_000826_100 Hb_002042_150 Hb_002042_150 Hb_045003_010--Hb_002042_150 Hb_001353_010 Hb_001353_010 Hb_045003_010--Hb_001353_010 Hb_154948_040 Hb_154948_040 Hb_045003_010--Hb_154948_040 Hb_000566_120 Hb_000566_120 Hb_045003_010--Hb_000566_120 Hb_006326_040 Hb_006326_040 Hb_045003_010--Hb_006326_040 Hb_002995_050 Hb_002995_050 Hb_045003_010--Hb_002995_050 Hb_000563_200 Hb_000563_200 Hb_145880_020--Hb_000563_200 Hb_001410_060 Hb_001410_060 Hb_145880_020--Hb_001410_060 Hb_148209_010 Hb_148209_010 Hb_145880_020--Hb_148209_010 Hb_000110_120 Hb_000110_120 Hb_145880_020--Hb_000110_120 Hb_145880_020--Hb_002303_060 Hb_004627_030 Hb_004627_030 Hb_145880_020--Hb_004627_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.7364 3.54452 13.0161 49.4565 12.4377 8.05426
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.3091 44.2615 14.7458 11.3334 13.9104

CAGE analysis