Hb_000094_290

Information

Type -
Description -
Location Contig94: 218614-220551
Sequence    

Annotation

kegg
ID rcu:RCOM_1593920
description hypothetical protein
nr
ID XP_012071816.1
description PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Jatropha curcas]
swissprot
ID Q8H0Y1
description Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana GN=OEP24B PE=2 SV=1
trembl
ID A0A067L1X1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04410 PE=4 SV=1
Gene Ontology
ID GO:0009526
description outer envelope pore protein chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_290 0.0 - - PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Jatropha curcas]
2 Hb_000173_060 0.0981494798 - - Dual specificity protein phosphatase, putative [Ricinus communis]
3 Hb_000300_090 0.1005165189 - - catalytic, putative [Ricinus communis]
4 Hb_000622_350 0.1133635559 - - PREDICTED: protein ABIL1 [Jatropha curcas]
5 Hb_000889_100 0.1198579036 - - PREDICTED: syntaxin-132-like isoform X2 [Sesamum indicum]
6 Hb_011926_040 0.1201740568 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
7 Hb_010003_010 0.1234127208 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
8 Hb_007192_020 0.1253557875 - - PREDICTED: high-affinity nitrate transporter 3.1-like [Jatropha curcas]
9 Hb_051257_010 0.1287076046 - - -
10 Hb_009913_040 0.1339004662 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
11 Hb_006006_060 0.1362469787 - - PREDICTED: triacylglycerol lipase 1 isoform X2 [Jatropha curcas]
12 Hb_000035_220 0.1376918696 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
13 Hb_164010_050 0.1422035166 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Jatropha curcas]
14 Hb_010984_020 0.1430344605 - - Translation factor GUF1 like, chloroplastic [Glycine soja]
15 Hb_006810_030 0.1447514244 - - Uncharacterized protein isoform 1 [Theobroma cacao]
16 Hb_000684_260 0.1471524897 - - PREDICTED: probable DNA helicase MCM8 isoform X2 [Jatropha curcas]
17 Hb_134429_010 0.1488546726 - - conserved hypothetical protein [Ricinus communis]
18 Hb_050912_010 0.1496365777 - - PREDICTED: amidase 1-like isoform X2 [Jatropha curcas]
19 Hb_000103_250 0.1500181829 transcription factor TF Family: Tify PREDICTED: protein TIFY 4B isoform X3 [Jatropha curcas]
20 Hb_005062_060 0.1519987936 - - PREDICTED: uncharacterized protein At4g06598-like [Jatropha curcas]

Gene co-expression network

sample Hb_000094_290 Hb_000094_290 Hb_000173_060 Hb_000173_060 Hb_000094_290--Hb_000173_060 Hb_000300_090 Hb_000300_090 Hb_000094_290--Hb_000300_090 Hb_000622_350 Hb_000622_350 Hb_000094_290--Hb_000622_350 Hb_000889_100 Hb_000889_100 Hb_000094_290--Hb_000889_100 Hb_011926_040 Hb_011926_040 Hb_000094_290--Hb_011926_040 Hb_010003_010 Hb_010003_010 Hb_000094_290--Hb_010003_010 Hb_009913_040 Hb_009913_040 Hb_000173_060--Hb_009913_040 Hb_000173_060--Hb_011926_040 Hb_000173_060--Hb_000622_350 Hb_003058_100 Hb_003058_100 Hb_000173_060--Hb_003058_100 Hb_000173_060--Hb_000300_090 Hb_000035_220 Hb_000035_220 Hb_000300_090--Hb_000035_220 Hb_000510_150 Hb_000510_150 Hb_000300_090--Hb_000510_150 Hb_014361_060 Hb_014361_060 Hb_000300_090--Hb_014361_060 Hb_000503_020 Hb_000503_020 Hb_000300_090--Hb_000503_020 Hb_002053_050 Hb_002053_050 Hb_000300_090--Hb_002053_050 Hb_002660_110 Hb_002660_110 Hb_000622_350--Hb_002660_110 Hb_004126_040 Hb_004126_040 Hb_000622_350--Hb_004126_040 Hb_000074_100 Hb_000074_100 Hb_000622_350--Hb_000074_100 Hb_000622_350--Hb_000889_100 Hb_051257_010 Hb_051257_010 Hb_000889_100--Hb_051257_010 Hb_017014_010 Hb_017014_010 Hb_000889_100--Hb_017014_010 Hb_000889_100--Hb_000035_220 Hb_164010_050 Hb_164010_050 Hb_000889_100--Hb_164010_050 Hb_011926_040--Hb_009913_040 Hb_000399_060 Hb_000399_060 Hb_011926_040--Hb_000399_060 Hb_006006_060 Hb_006006_060 Hb_011926_040--Hb_006006_060 Hb_174865_040 Hb_174865_040 Hb_011926_040--Hb_174865_040 Hb_000638_070 Hb_000638_070 Hb_011926_040--Hb_000638_070 Hb_010003_010--Hb_000889_100 Hb_000077_290 Hb_000077_290 Hb_010003_010--Hb_000077_290 Hb_000230_180 Hb_000230_180 Hb_010003_010--Hb_000230_180 Hb_010003_010--Hb_051257_010 Hb_005170_010 Hb_005170_010 Hb_010003_010--Hb_005170_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.0558 7.73111 34.4964 64.6443 9.49955 37.3301
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.57379 12.8636 9.67385 16.3739 39.588

CAGE analysis