Hb_006006_060

Information

Type -
Description -
Location Contig6006: 106380-113286
Sequence    

Annotation

kegg
ID rcu:RCOM_0811170
description Triacylglycerol lipase 1 precursor, putative (EC:3.1.1.3)
nr
ID XP_012075971.1
description PREDICTED: triacylglycerol lipase 1 isoform X2 [Jatropha curcas]
swissprot
ID Q71DJ5
description Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1
trembl
ID A0A067LFA2
description Lipase OS=Jatropha curcas GN=JCGZ_15473 PE=3 SV=1
Gene Ontology
ID GO:0006629
description triacylglycerol lipase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50568: 106597-113237 , PASA_asmbl_50570: 111109-111268
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006006_060 0.0 - - PREDICTED: triacylglycerol lipase 1 isoform X2 [Jatropha curcas]
2 Hb_000200_350 0.0851855916 - - PREDICTED: uncharacterized protein LOC105636929 [Jatropha curcas]
3 Hb_022693_130 0.0895403068 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
4 Hb_000388_150 0.0905439327 - - hypothetical protein JCGZ_21651 [Jatropha curcas]
5 Hb_010344_030 0.091205803 - - conserved hypothetical protein [Ricinus communis]
6 Hb_011926_040 0.0938490654 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
7 Hb_010984_020 0.0976451243 - - Translation factor GUF1 like, chloroplastic [Glycine soja]
8 Hb_174865_040 0.0983909504 - - PREDICTED: crt homolog 1 isoform X2 [Jatropha curcas]
9 Hb_002053_050 0.0998432503 - - Kinesin heavy chain, putative [Ricinus communis]
10 Hb_000029_110 0.1029066228 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003058_100 0.1045340013 - - PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Jatropha curcas]
12 Hb_005062_060 0.1047452197 - - PREDICTED: uncharacterized protein At4g06598-like [Jatropha curcas]
13 Hb_073973_120 0.1049427311 - - zinc finger protein, putative [Ricinus communis]
14 Hb_004710_020 0.1066511945 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
15 Hb_000107_250 0.1083757968 - - voltage-gated clc-type chloride channel, putative [Ricinus communis]
16 Hb_000108_020 0.1089483682 - - hypothetical protein POPTR_0019s02430g [Populus trichocarpa]
17 Hb_010172_010 0.112250243 - - PREDICTED: probable beta-1,3-galactosyltransferase 20 [Jatropha curcas]
18 Hb_000300_090 0.1124851178 - - catalytic, putative [Ricinus communis]
19 Hb_000645_180 0.1148310622 rubber biosynthesis Gene Name: Dihydrolipoamide dehydrogenase Lipoamide dehydrogenase 1 isoform 1 [Theobroma cacao]
20 Hb_000645_070 0.1165695043 - - aldehyde dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_006006_060 Hb_006006_060 Hb_000200_350 Hb_000200_350 Hb_006006_060--Hb_000200_350 Hb_022693_130 Hb_022693_130 Hb_006006_060--Hb_022693_130 Hb_000388_150 Hb_000388_150 Hb_006006_060--Hb_000388_150 Hb_010344_030 Hb_010344_030 Hb_006006_060--Hb_010344_030 Hb_011926_040 Hb_011926_040 Hb_006006_060--Hb_011926_040 Hb_010984_020 Hb_010984_020 Hb_006006_060--Hb_010984_020 Hb_000934_110 Hb_000934_110 Hb_000200_350--Hb_000934_110 Hb_000200_350--Hb_010344_030 Hb_009020_040 Hb_009020_040 Hb_000200_350--Hb_009020_040 Hb_001157_230 Hb_001157_230 Hb_000200_350--Hb_001157_230 Hb_024184_010 Hb_024184_010 Hb_000200_350--Hb_024184_010 Hb_160271_010 Hb_160271_010 Hb_022693_130--Hb_160271_010 Hb_005062_060 Hb_005062_060 Hb_022693_130--Hb_005062_060 Hb_068079_010 Hb_068079_010 Hb_022693_130--Hb_068079_010 Hb_000645_180 Hb_000645_180 Hb_022693_130--Hb_000645_180 Hb_000108_020 Hb_000108_020 Hb_022693_130--Hb_000108_020 Hb_000107_250 Hb_000107_250 Hb_022693_130--Hb_000107_250 Hb_000480_040 Hb_000480_040 Hb_000388_150--Hb_000480_040 Hb_174865_040 Hb_174865_040 Hb_000388_150--Hb_174865_040 Hb_000388_150--Hb_010344_030 Hb_000388_150--Hb_022693_130 Hb_000388_150--Hb_005062_060 Hb_005250_010 Hb_005250_010 Hb_010344_030--Hb_005250_010 Hb_004735_020 Hb_004735_020 Hb_010344_030--Hb_004735_020 Hb_003462_060 Hb_003462_060 Hb_010344_030--Hb_003462_060 Hb_009913_040 Hb_009913_040 Hb_011926_040--Hb_009913_040 Hb_000399_060 Hb_000399_060 Hb_011926_040--Hb_000399_060 Hb_000173_060 Hb_000173_060 Hb_011926_040--Hb_000173_060 Hb_011926_040--Hb_174865_040 Hb_000638_070 Hb_000638_070 Hb_011926_040--Hb_000638_070 Hb_000977_290 Hb_000977_290 Hb_010984_020--Hb_000977_290 Hb_007192_020 Hb_007192_020 Hb_010984_020--Hb_007192_020 Hb_004710_020 Hb_004710_020 Hb_010984_020--Hb_004710_020 Hb_000959_300 Hb_000959_300 Hb_010984_020--Hb_000959_300 Hb_000510_150 Hb_000510_150 Hb_010984_020--Hb_000510_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.5902 1.30542 5.01659 6.43411 2.18352 3.30161
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.55252 1.26092 1.2669 2.33017 7.84664

CAGE analysis