Hb_066778_010

Information

Type -
Description -
Location Contig66778: 8715-9158
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066778_010 0.0 - - -
2 Hb_053709_040 0.1518903678 - - putative actin-97 protein [Linum usitatissimum]
3 Hb_001366_170 0.1800554797 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
4 Hb_001902_200 0.1804598014 - - PREDICTED: tubulin beta-1 chain [Eucalyptus grandis]
5 Hb_007483_060 0.1839235066 desease resistance Gene Name: ABC_membrane multidrug resistance protein 1, 2, putative [Ricinus communis]
6 Hb_007632_100 0.1885109809 transcription factor TF Family: NF-YB ccaat-binding transcription factor subunit A, putative [Ricinus communis]
7 Hb_031284_030 0.1919058847 - - conserved hypothetical protein [Ricinus communis]
8 Hb_118939_010 0.1929092155 - - protein binding protein, putative [Ricinus communis]
9 Hb_000540_160 0.1982513491 - - PREDICTED: mitogen-activated protein kinase homolog NTF6 [Jatropha curcas]
10 Hb_002490_030 0.2009680274 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002316_080 0.201263537 - - PREDICTED: RING-H2 finger protein ATL46-like [Populus euphratica]
12 Hb_000098_170 0.2053259758 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
13 Hb_008185_020 0.2056862257 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
14 Hb_005539_370 0.2151267657 - - ring finger protein, putative [Ricinus communis]
15 Hb_002900_100 0.2159360503 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
16 Hb_054865_160 0.2159731182 - - PREDICTED: D-arabinono-1,4-lactone oxidase-like [Jatropha curcas]
17 Hb_003207_150 0.21679333 - - PREDICTED: SPX domain-containing membrane protein At4g22990-like [Jatropha curcas]
18 Hb_000049_080 0.2184762975 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
19 Hb_010883_180 0.2251657075 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
20 Hb_000152_190 0.226816989 - - PREDICTED: K(+) efflux antiporter 5 [Jatropha curcas]

Gene co-expression network

sample Hb_066778_010 Hb_066778_010 Hb_053709_040 Hb_053709_040 Hb_066778_010--Hb_053709_040 Hb_001366_170 Hb_001366_170 Hb_066778_010--Hb_001366_170 Hb_001902_200 Hb_001902_200 Hb_066778_010--Hb_001902_200 Hb_007483_060 Hb_007483_060 Hb_066778_010--Hb_007483_060 Hb_007632_100 Hb_007632_100 Hb_066778_010--Hb_007632_100 Hb_031284_030 Hb_031284_030 Hb_066778_010--Hb_031284_030 Hb_003207_150 Hb_003207_150 Hb_053709_040--Hb_003207_150 Hb_053709_040--Hb_001366_170 Hb_034726_010 Hb_034726_010 Hb_053709_040--Hb_034726_010 Hb_008185_020 Hb_008185_020 Hb_053709_040--Hb_008185_020 Hb_053709_040--Hb_007632_100 Hb_000177_110 Hb_000177_110 Hb_053709_040--Hb_000177_110 Hb_001366_170--Hb_001902_200 Hb_001366_170--Hb_003207_150 Hb_002490_030 Hb_002490_030 Hb_001366_170--Hb_002490_030 Hb_006351_020 Hb_006351_020 Hb_001366_170--Hb_006351_020 Hb_004032_210 Hb_004032_210 Hb_001366_170--Hb_004032_210 Hb_004147_070 Hb_004147_070 Hb_001902_200--Hb_004147_070 Hb_003813_060 Hb_003813_060 Hb_001902_200--Hb_003813_060 Hb_001369_630 Hb_001369_630 Hb_001902_200--Hb_001369_630 Hb_000086_290 Hb_000086_290 Hb_001902_200--Hb_000086_290 Hb_003408_010 Hb_003408_010 Hb_001902_200--Hb_003408_010 Hb_007483_060--Hb_000177_110 Hb_002316_080 Hb_002316_080 Hb_007483_060--Hb_002316_080 Hb_000098_170 Hb_000098_170 Hb_007483_060--Hb_000098_170 Hb_118939_010 Hb_118939_010 Hb_007483_060--Hb_118939_010 Hb_007483_060--Hb_003207_150 Hb_007483_060--Hb_053709_040 Hb_024074_020 Hb_024074_020 Hb_007632_100--Hb_024074_020 Hb_007632_100--Hb_003207_150 Hb_007632_100--Hb_001366_170 Hb_003058_230 Hb_003058_230 Hb_007632_100--Hb_003058_230 Hb_002660_110 Hb_002660_110 Hb_007632_100--Hb_002660_110 Hb_031284_030--Hb_006351_020 Hb_000023_110 Hb_000023_110 Hb_031284_030--Hb_000023_110 Hb_001450_040 Hb_001450_040 Hb_031284_030--Hb_001450_040 Hb_000152_190 Hb_000152_190 Hb_031284_030--Hb_000152_190 Hb_006889_030 Hb_006889_030 Hb_031284_030--Hb_006889_030 Hb_000327_360 Hb_000327_360 Hb_031284_030--Hb_000327_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.509473 0.447533 3.98781 10.3119 0.572748 1.2911
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.881505 1.66018 0.593077 1.45054

CAGE analysis