Hb_000152_190

Information

Type -
Description -
Location Contig152: 150424-157153
Sequence    

Annotation

kegg
ID tcc:TCM_015011
description Glutathione-regulated potassium-efflux system protein kefB
nr
ID XP_012090375.1
description PREDICTED: K(+) efflux antiporter 5 [Jatropha curcas]
swissprot
ID Q8VYR9
description K(+) efflux antiporter 5 OS=Arabidopsis thaliana GN=KEA5 PE=2 SV=1
trembl
ID A0A067JS54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26205 PE=4 SV=1
Gene Ontology
ID GO:0016021
description k(+) efflux antiporter 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12959: 150511-154587
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_190 0.0 - - PREDICTED: K(+) efflux antiporter 5 [Jatropha curcas]
2 Hb_003540_080 0.0808072108 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
3 Hb_000258_220 0.107507125 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
4 Hb_006351_020 0.1077766833 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
5 Hb_004223_140 0.1084183858 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
6 Hb_003929_180 0.1127831995 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X1 [Glycine max]
7 Hb_164010_050 0.1150149138 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Jatropha curcas]
8 Hb_011214_110 0.1160629055 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
9 Hb_004032_210 0.118780318 - - conserved hypothetical protein [Ricinus communis]
10 Hb_029584_120 0.12000389 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
11 Hb_019654_060 0.120736215 - - PREDICTED: rop guanine nucleotide exchange factor 1-like isoform X1 [Jatropha curcas]
12 Hb_002942_230 0.1208503408 - - PREDICTED: long chain base biosynthesis protein 2a [Populus euphratica]
13 Hb_003680_030 0.1217507797 - - PREDICTED: aspartic proteinase-like protein 2 isoform X3 [Jatropha curcas]
14 Hb_000035_220 0.1218029433 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
15 Hb_005511_130 0.1272262673 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
16 Hb_000012_080 0.1284578647 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
17 Hb_004126_040 0.1285082508 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000656_160 0.1289206169 - - PREDICTED: transmembrane protein 87A [Jatropha curcas]
19 Hb_005074_040 0.1290619424 - - ATP binding protein, putative [Ricinus communis]
20 Hb_008025_010 0.1299197899 - - PREDICTED: lysosomal beta glucosidase-like [Musa acuminata subsp. malaccensis]

Gene co-expression network

sample Hb_000152_190 Hb_000152_190 Hb_003540_080 Hb_003540_080 Hb_000152_190--Hb_003540_080 Hb_000258_220 Hb_000258_220 Hb_000152_190--Hb_000258_220 Hb_006351_020 Hb_006351_020 Hb_000152_190--Hb_006351_020 Hb_004223_140 Hb_004223_140 Hb_000152_190--Hb_004223_140 Hb_003929_180 Hb_003929_180 Hb_000152_190--Hb_003929_180 Hb_164010_050 Hb_164010_050 Hb_000152_190--Hb_164010_050 Hb_000035_220 Hb_000035_220 Hb_003540_080--Hb_000035_220 Hb_002942_230 Hb_002942_230 Hb_003540_080--Hb_002942_230 Hb_000510_150 Hb_000510_150 Hb_003540_080--Hb_000510_150 Hb_003540_080--Hb_000258_220 Hb_000665_170 Hb_000665_170 Hb_003540_080--Hb_000665_170 Hb_029584_120 Hb_029584_120 Hb_000258_220--Hb_029584_120 Hb_000134_120 Hb_000134_120 Hb_000258_220--Hb_000134_120 Hb_000503_020 Hb_000503_020 Hb_000258_220--Hb_000503_020 Hb_074399_010 Hb_074399_010 Hb_000258_220--Hb_074399_010 Hb_000054_040 Hb_000054_040 Hb_000258_220--Hb_000054_040 Hb_001119_070 Hb_001119_070 Hb_006351_020--Hb_001119_070 Hb_001545_130 Hb_001545_130 Hb_006351_020--Hb_001545_130 Hb_006351_020--Hb_003929_180 Hb_006351_020--Hb_004223_140 Hb_004032_210 Hb_004032_210 Hb_006351_020--Hb_004032_210 Hb_004223_140--Hb_003929_180 Hb_002028_190 Hb_002028_190 Hb_004223_140--Hb_002028_190 Hb_004223_140--Hb_004032_210 Hb_018845_010 Hb_018845_010 Hb_004223_140--Hb_018845_010 Hb_000012_080 Hb_000012_080 Hb_004223_140--Hb_000012_080 Hb_003929_180--Hb_004032_210 Hb_008725_270 Hb_008725_270 Hb_003929_180--Hb_008725_270 Hb_004218_130 Hb_004218_130 Hb_003929_180--Hb_004218_130 Hb_003929_180--Hb_000012_080 Hb_051257_010 Hb_051257_010 Hb_164010_050--Hb_051257_010 Hb_000866_070 Hb_000866_070 Hb_164010_050--Hb_000866_070 Hb_000000_330 Hb_000000_330 Hb_164010_050--Hb_000000_330 Hb_164010_050--Hb_000258_220 Hb_164010_050--Hb_074399_010 Hb_164010_050--Hb_000503_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.59858 2.14066 9.6414 15.1092 2.99595 3.43555
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.27716 1.20007 2.92311 3.63755 6.15851

CAGE analysis