Hb_109515_010

Information

Type -
Description -
Location Contig109515: 187-1290
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_109515_010 0.0 - - -
2 Hb_001396_120 0.2214009177 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 16 [Jatropha curcas]
3 Hb_089114_010 0.2234573244 - - PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
4 Hb_001198_130 0.2258958222 - - PREDICTED: potassium channel AKT2/3 [Jatropha curcas]
5 Hb_001878_020 0.2284458647 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
6 Hb_002095_030 0.2305752973 - - hypothetical protein MIMGU_mgv1a021906mg, partial [Erythranthe guttata]
7 Hb_000331_070 0.2306541001 - - PREDICTED: uncharacterized protein LOC105636644 [Jatropha curcas]
8 Hb_000027_140 0.231096771 - - PREDICTED: uncharacterized protein LOC105642063 [Jatropha curcas]
9 Hb_002014_050 0.2333057174 - - PREDICTED: proline-rich receptor-like protein kinase PERK1 isoform X2 [Populus euphratica]
10 Hb_004837_200 0.2382071982 - - hypothetical protein POPTR_0001s26450g [Populus trichocarpa]
11 Hb_002965_080 0.2445850685 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 15-like [Jatropha curcas]
12 Hb_001894_160 0.2459764345 - - conserved hypothetical protein [Ricinus communis]
13 Hb_161901_020 0.2467208634 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Vitis vinifera]
14 Hb_001627_010 0.2469831965 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
15 Hb_047442_010 0.2471884326 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
16 Hb_000622_210 0.2497362992 transcription factor TF Family: bZIP PREDICTED: common plant regulatory factor 1-like isoform X3 [Jatropha curcas]
17 Hb_178818_010 0.2498016566 - - CRINKLY4 related 3, putative [Theobroma cacao]
18 Hb_000399_030 0.2510988805 - - PREDICTED: uncharacterized protein LOC105634579 [Jatropha curcas]
19 Hb_001386_020 0.251649078 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000086_640 0.2522483609 - - Phytosulfokine receptor precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_109515_010 Hb_109515_010 Hb_001396_120 Hb_001396_120 Hb_109515_010--Hb_001396_120 Hb_089114_010 Hb_089114_010 Hb_109515_010--Hb_089114_010 Hb_001198_130 Hb_001198_130 Hb_109515_010--Hb_001198_130 Hb_001878_020 Hb_001878_020 Hb_109515_010--Hb_001878_020 Hb_002095_030 Hb_002095_030 Hb_109515_010--Hb_002095_030 Hb_000331_070 Hb_000331_070 Hb_109515_010--Hb_000331_070 Hb_001519_060 Hb_001519_060 Hb_001396_120--Hb_001519_060 Hb_000336_180 Hb_000336_180 Hb_001396_120--Hb_000336_180 Hb_002965_080 Hb_002965_080 Hb_001396_120--Hb_002965_080 Hb_002014_050 Hb_002014_050 Hb_001396_120--Hb_002014_050 Hb_000009_200 Hb_000009_200 Hb_001396_120--Hb_000009_200 Hb_005725_280 Hb_005725_280 Hb_001396_120--Hb_005725_280 Hb_002965_070 Hb_002965_070 Hb_089114_010--Hb_002965_070 Hb_061908_030 Hb_061908_030 Hb_089114_010--Hb_061908_030 Hb_033930_010 Hb_033930_010 Hb_089114_010--Hb_033930_010 Hb_047442_010 Hb_047442_010 Hb_089114_010--Hb_047442_010 Hb_000317_190 Hb_000317_190 Hb_089114_010--Hb_000317_190 Hb_001894_160 Hb_001894_160 Hb_089114_010--Hb_001894_160 Hb_000987_100 Hb_000987_100 Hb_001198_130--Hb_000987_100 Hb_000027_140 Hb_000027_140 Hb_001198_130--Hb_000027_140 Hb_001168_070 Hb_001168_070 Hb_001198_130--Hb_001168_070 Hb_082655_010 Hb_082655_010 Hb_001198_130--Hb_082655_010 Hb_000923_100 Hb_000923_100 Hb_001198_130--Hb_000923_100 Hb_001198_130--Hb_001396_120 Hb_001242_180 Hb_001242_180 Hb_001878_020--Hb_001242_180 Hb_000454_080 Hb_000454_080 Hb_001878_020--Hb_000454_080 Hb_005348_090 Hb_005348_090 Hb_001878_020--Hb_005348_090 Hb_002400_020 Hb_002400_020 Hb_001878_020--Hb_002400_020 Hb_002311_160 Hb_002311_160 Hb_001878_020--Hb_002311_160 Hb_124677_020 Hb_124677_020 Hb_001878_020--Hb_124677_020 Hb_000495_050 Hb_000495_050 Hb_002095_030--Hb_000495_050 Hb_002107_110 Hb_002107_110 Hb_002095_030--Hb_002107_110 Hb_004837_200 Hb_004837_200 Hb_002095_030--Hb_004837_200 Hb_000359_260 Hb_000359_260 Hb_002095_030--Hb_000359_260 Hb_014361_170 Hb_014361_170 Hb_002095_030--Hb_014361_170 Hb_018633_010 Hb_018633_010 Hb_002095_030--Hb_018633_010 Hb_001269_510 Hb_001269_510 Hb_000331_070--Hb_001269_510 Hb_000331_070--Hb_002965_070 Hb_000331_070--Hb_089114_010 Hb_006935_040 Hb_006935_040 Hb_000331_070--Hb_006935_040 Hb_001776_200 Hb_001776_200 Hb_000331_070--Hb_001776_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.127456 0.914741 1.1499 0.268249 0.0503758 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.349732 0 0 0.113406 0.34875

CAGE analysis