Hb_000317_190

Information

Type -
Description -
Location Contig317: 129051-143187
Sequence    

Annotation

kegg
ID rcu:RCOM_1176580
description diacylglycerol kinase, alpha, putative (EC:2.7.1.107)
nr
ID XP_012088366.1
description PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
swissprot
ID Q9C5E5
description Diacylglycerol kinase 5 OS=Arabidopsis thaliana GN=DGK5 PE=2 SV=1
trembl
ID A0A067JK09
description Diacylglycerol kinase OS=Jatropha curcas GN=JCGZ_25859 PE=3 SV=1
Gene Ontology
ID GO:0004143
description diacylglycerol kinase 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33374: 129108-140762 , PASA_asmbl_33375: 134437-140724
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000317_190 0.0 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
2 Hb_005941_020 0.105185886 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
3 Hb_124951_010 0.1078667339 - - chitinase-like protein [Hevea brasiliensis]
4 Hb_047442_010 0.1085949704 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
5 Hb_001894_160 0.1151529968 - - conserved hypothetical protein [Ricinus communis]
6 Hb_011671_110 0.1168586522 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
7 Hb_015026_020 0.1190471109 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os07g0563300 [Jatropha curcas]
8 Hb_003747_050 0.1219591214 - - PREDICTED: WD repeat-containing protein LWD1 [Jatropha curcas]
9 Hb_033930_010 0.1280114045 - - PREDICTED: uncharacterized protein LOC105635519 [Jatropha curcas]
10 Hb_000076_100 0.1352400829 - - PREDICTED: septum-promoting GTP-binding protein 1 [Jatropha curcas]
11 Hb_002965_070 0.1379628928 - - PREDICTED: extensin [Jatropha curcas]
12 Hb_000803_090 0.1390494657 - - PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha curcas]
13 Hb_011609_010 0.1464748467 - - PREDICTED: zinc transporter 5 [Jatropha curcas]
14 Hb_000928_250 0.1484694068 - - calcium ion binding protein, putative [Ricinus communis]
15 Hb_001776_200 0.1486193272 - - PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Pyrus x bretschneideri]
16 Hb_000189_390 0.1489828839 - - PREDICTED: pollen-specific protein SF21-like isoform X1 [Jatropha curcas]
17 Hb_000212_300 0.1517812391 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
18 Hb_005394_010 0.151955977 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
19 Hb_010368_080 0.1522508966 - - PREDICTED: uncharacterized protein LOC105630287 [Jatropha curcas]
20 Hb_013016_010 0.1530866995 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000317_190 Hb_000317_190 Hb_005941_020 Hb_005941_020 Hb_000317_190--Hb_005941_020 Hb_124951_010 Hb_124951_010 Hb_000317_190--Hb_124951_010 Hb_047442_010 Hb_047442_010 Hb_000317_190--Hb_047442_010 Hb_001894_160 Hb_001894_160 Hb_000317_190--Hb_001894_160 Hb_011671_110 Hb_011671_110 Hb_000317_190--Hb_011671_110 Hb_015026_020 Hb_015026_020 Hb_000317_190--Hb_015026_020 Hb_005941_020--Hb_001894_160 Hb_033930_010 Hb_033930_010 Hb_005941_020--Hb_033930_010 Hb_005941_020--Hb_011671_110 Hb_005941_020--Hb_015026_020 Hb_000086_640 Hb_000086_640 Hb_005941_020--Hb_000086_640 Hb_002600_130 Hb_002600_130 Hb_124951_010--Hb_002600_130 Hb_000076_100 Hb_000076_100 Hb_124951_010--Hb_000076_100 Hb_163968_010 Hb_163968_010 Hb_124951_010--Hb_163968_010 Hb_001214_190 Hb_001214_190 Hb_124951_010--Hb_001214_190 Hb_000134_030 Hb_000134_030 Hb_124951_010--Hb_000134_030 Hb_047442_010--Hb_011671_110 Hb_002965_070 Hb_002965_070 Hb_047442_010--Hb_002965_070 Hb_005394_010 Hb_005394_010 Hb_047442_010--Hb_005394_010 Hb_000111_390 Hb_000111_390 Hb_047442_010--Hb_000111_390 Hb_047442_010--Hb_001894_160 Hb_001894_160--Hb_011671_110 Hb_001894_160--Hb_033930_010 Hb_000928_250 Hb_000928_250 Hb_001894_160--Hb_000928_250 Hb_001894_160--Hb_015026_020 Hb_000622_210 Hb_000622_210 Hb_001894_160--Hb_000622_210 Hb_011671_110--Hb_033930_010 Hb_011671_110--Hb_015026_020 Hb_001776_200 Hb_001776_200 Hb_011671_110--Hb_001776_200 Hb_011671_110--Hb_005394_010 Hb_015026_020--Hb_000928_250 Hb_003106_200 Hb_003106_200 Hb_015026_020--Hb_003106_200 Hb_015026_020--Hb_000076_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.1056 39.3206 77.5619 11.2412 8.08781 8.30163
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.90298 3.56161 3.07659 9.68754 13.304

CAGE analysis